| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0873 |
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| Symbol | |
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| ID | 5538339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1142098 |
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| End bp | 1143324 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893024 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431007 |
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| Protein GI | 156740878 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1690] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0250063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000169408 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTCAGA TCATCGATGG CATTCCGGTC TGGGGCGAAC ACGACGAAGC CACCATTGAG
CAGATTCGCC GCTGCGCCCG CGATCCCGAA GCGGTCAAGG CGGCGCTGAT GGCGGATGGG
CATGTCGGCT ACAGTATGCC GATTGGCGGC GTTGTCGCCT ACCGCGACGC CGTCAGTCCC
AGCGGCGTCG GGTACGACAT TTCCTGCGGC ATCAAAGGGG TCCGCACCAA CCTGCGCGCC
GATGACATTC GCAAAGATAT CGGCAAGATT ATGGACCAGG TGGCGCGCGA AGTAGTCTTC
GGCGTTGGCA GTACCAGCGG CAAAGCTGCC AATCATCCGT TATTCGACGA CCCGACCTGG
CGCGATATTC CAGAGGTCGG CAAACTGCGC CAGATGGCGC GTGAGCAGCT CGGCACCGTC
GGTTCAGGAA ATCACTGGGT CGATATTCTC GAAGACGAGG AAGGATGGGT GTGGGTTGCG
GCGCACTTTG GCAGCCGGGG TCTCGGGCAT CGCATTGCGA GTGGCTTCCT CAACCTGGCA
CACGGACGAC CGTTCGATGC TCCGGCGCCG GGTGAGTCGA TGCAGCAGCC GGCGACGGTC
ATCTCGCTGC GGCGCGACCT GGGACAGGCG TACTGGCAGG CCATGACGCT CGCCGGACGC
TATGCGTATG CCGGGCGCGA CTTCGTGGTG CAGCAGGTGC TCGACATCCT GGGCGCTCAG
GTGACCGAAG AGGTTCACAA CCACCACAAC TACGCCTGGA AAGAAAAGGT CAACGGTGAG
GAACTGATCG TCGTGCGCAA AGGCGCTACA CCTGCCTGGC CCGGTCAGCG TGGCTTTGTC
GGCGGTTCGA TGGGAGACAT CAGCGTGGTG GTTGAAGGAG TGGAGAGCGA GGAGTCGCGG
CTTGGACTGC ACAGCACTAT CCACGGCGCC GGGCGCGTCA TGAGTCGCAT ACAGGCGGCT
GGCAAGCGGC GCTGGGTGAA GCGCAACGGT CGGCGGGTGC AGGAAGTCGT CAAGCCGGGC
AAGATCACCC GTGAAATGAT GCTCGAATGG CTGCGCCGCG AGGGAGTCGA ACTGCGCGGC
GGCGGCACGG ATGAGAGTCC GCACGTTTAC CGCCGCTTGC CGGAGGTGCT GAAGCATCAT
GCCAACACGA TCAAGATCGT CCACACGCTC AAGCCGATGG GTGTGGCGAT GGCAGGAGAA
GATGTGTTCG ATCCGTACAA GGATTAG
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| Protein sequence | MFQIIDGIPV WGEHDEATIE QIRRCARDPE AVKAALMADG HVGYSMPIGG VVAYRDAVSP
SGVGYDISCG IKGVRTNLRA DDIRKDIGKI MDQVAREVVF GVGSTSGKAA NHPLFDDPTW
RDIPEVGKLR QMAREQLGTV GSGNHWVDIL EDEEGWVWVA AHFGSRGLGH RIASGFLNLA
HGRPFDAPAP GESMQQPATV ISLRRDLGQA YWQAMTLAGR YAYAGRDFVV QQVLDILGAQ
VTEEVHNHHN YAWKEKVNGE ELIVVRKGAT PAWPGQRGFV GGSMGDISVV VEGVESEESR
LGLHSTIHGA GRVMSRIQAA GKRRWVKRNG RRVQEVVKPG KITREMMLEW LRREGVELRG
GGTDESPHVY RRLPEVLKHH ANTIKIVHTL KPMGVAMAGE DVFDPYKD
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