| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0872 |
|---|
| Symbol | |
|---|
| ID | 5538338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1141723 |
|---|
| End bp | 1142037 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640893023 |
|---|
| Product | DNA polymerase beta subunit |
|---|
| Protein accession | YP_001431006 |
|---|
| Protein GI | 156740877 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.178171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000000998415 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTGT GCCCACAAGA CCTGGCTGTT CTGCGCGATA TTCTGCGCCA ATATGACCAG
GCGCGCGTCT TTGGTTTGCG CGCCACCGGC GCCGCCGGAC GCACATCCGA CGTTGATCTG
GCGATTACTG CACCGGATAT GAGCAGCAGT GCGTGGCACG ATTTCTGCGA AGCGCTCGAG
TGCGCGCCGA TCATTGATGA ATTGGATATT GTGCGCGAAG AGGACGTGGT CGAAGAGCGG
TTGCGTGAGG CGATGCAGCG GGATGAGGTT GTGATGTACC AATCGGGCGA TGGGGAGAGT
CGCACAGAAC CATGA
|
|---|
| Protein sequence | MTLCPQDLAV LRDILRQYDQ ARVFGLRATG AAGRTSDVDL AITAPDMSSS AWHDFCEALE
CAPIIDELDI VREEDVVEER LREAMQRDEV VMYQSGDGES RTEP
|
|---|
| |