| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0868 |
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| Symbol | |
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| ID | 5538334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1136677 |
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| End bp | 1138197 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893019 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001431002 |
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| Protein GI | 156740873 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000121741 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAGTA TTCGGACGGT GTGGTTGACC ATTTTGCTCC TCTTTGCGTT GTTGCCCATG
CTCGTTGTTG GTGGTGTTCT CTCCTGGATC GGGAGAGACC TGCAAATCCG GCAGGCGCTG
AGCATTCAGC ATGAGATTGC CGAACGCAGC GAGGCGCTTG TGGTGAACTT TGTCGAAGAG
GCGCTTCTGG AGGCGAACAT ACTGGTGCGC ACACCCGCCT TTGTGAATGG ATCGCCGGAA
CAGCAGCGCG CATTGCTGTC GCAGACGCTC TTCGAGCGCA ATCTGTTCGA CAGCCTCGTC
ATTGCGGATG CAGCCGGCGT GGAACGGTTG GGCGTCTCGC GTCTTGGCAT CGCGCGCCCC
GATCAACTGA CCAACCGCGC GTCCGATCCT ATGTTTGCCG CAGCGGTGAG CACGGAACAA
CCGACGTTTG GCGAACTGCG GACCCATCCG CTCAACGGCG AATTGTTGTT ACCTATCGCA
CTGCCGTACC GCTTTCCCGG CGCCGCGAGC GTCACGGGCG TCCTGTTTGC CGAGGCGCGT
ATGAGCCGGG TGATTGAGCA GGTCGTCAAC ATACCGGTCG GTATGAACGG CGCCGTCACG
CTCTTCAATC GGAACGGGCA GGTTATTGCC CACCGTAATC GCGACCTGAT CGGGCGAACC
GTGGCGCTGC CGGTGACAGA CGAACCGCAG ACTCTGAGCG GCGCGGCCGG CACGATTGTC
CTCATGACCC TGCGCGATGT CGTGACGGGC GACTACATCT TGCGCATTGC CGTCGAACAA
CCGGTGGATG AGGTCTATCA ACCATTTGTT CAAAATCTCC AGATTATCGC AGCACTGGTG
GCGCTGACCG CAAGTGCGGC TGTGGTGGGC AGTATGATCG TTGTTCAGAC GATCACCCGC
CCGATTCTGC GCCTTGCCCA TGTGAGCGAA GCGATCAGCG TCGGCGATCT GTCGCAACGG
GTTCCAGTCA CGAGGCGTGA TGAGATCGGA CTATTGCAGC AGAACTTCAA TCGGATGGCG
GAGAATATTC TTGCGCAGCA AACGGCGCTC GCTGCGCGCA ACGCCGAACT CGAACAAAGT
TTCCAGGCGC AGCGCCGGTT GTTCGAGACG GTGCAGCAAC TCTCAACACC GCTGCTGCCG
GTGTGGGAAG GAGTGGTGGT GATGCCGATC ATCGGGCACG TGGACGCCGA ACGCGGTCGG
GCAATCCTCG ACGCCCTGTT GCACGGGATT GCCGAACGAC GCGCGCGGGT CGCTATTCTG
GACATTACCG GCATCGCCAC TGTTGATACG TCAGTGATCG CCATACTGAC GCGCATGATG
CAGGCATCTG CGCTGATTGG CGCAACGCCG ATGCTGGCGG GCATCTCGGC AGTGACGGCG
CACCTGATGG TGCAGGAGGG GGCCGCCGAC CTGAAGGTGC AGACGTATCG CACGTTACAG
AGCGCAATTA TGGCTGCCAT TGAAGGAGAT CGCCCCTTTC CTTTGCGGGT CTCGAACGGA
AGACAGCCAC GCACCGGATG A
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| Protein sequence | MRSIRTVWLT ILLLFALLPM LVVGGVLSWI GRDLQIRQAL SIQHEIAERS EALVVNFVEE
ALLEANILVR TPAFVNGSPE QQRALLSQTL FERNLFDSLV IADAAGVERL GVSRLGIARP
DQLTNRASDP MFAAAVSTEQ PTFGELRTHP LNGELLLPIA LPYRFPGAAS VTGVLFAEAR
MSRVIEQVVN IPVGMNGAVT LFNRNGQVIA HRNRDLIGRT VALPVTDEPQ TLSGAAGTIV
LMTLRDVVTG DYILRIAVEQ PVDEVYQPFV QNLQIIAALV ALTASAAVVG SMIVVQTITR
PILRLAHVSE AISVGDLSQR VPVTRRDEIG LLQQNFNRMA ENILAQQTAL AARNAELEQS
FQAQRRLFET VQQLSTPLLP VWEGVVVMPI IGHVDAERGR AILDALLHGI AERRARVAIL
DITGIATVDT SVIAILTRMM QASALIGATP MLAGISAVTA HLMVQEGAAD LKVQTYRTLQ
SAIMAAIEGD RPFPLRVSNG RQPRTG
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