| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0866 |
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| Symbol | |
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| ID | 5538332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1133584 |
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| End bp | 1134999 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893017 |
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| Product | tyrosine phenol-lyase |
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| Protein accession | YP_001431000 |
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| Protein GI | 156740871 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3033] Tryptophanase |
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| TIGRFAM ID | [TIGR02618] tyrosine phenol-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000757235 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCACC CAACCCCGCA AACGATGGGA CAACAATTCG GCAGGCGCTC CTGGGCGGAA
CCGTGGAAGA TCAAGATGGT TGAGCCATTG CGGGTTACCA CCCGTGAGGA GCGTGAACGC
GCGCTGGCGG AAGCCGGGTA CAATACCTTT CTTCTGCGCT CTGAGGATGT CTATATCGAT
CTGTTGACCG ATAGCGGCAC GAACGCCATG AGCGACCGTC AGTGGGCTGC GATCATGCTT
GGCGATGAGG CGTATGCTGG CAGCCGCAAC TTCTATCGGC TCGAAGCGAC GATCCAGCAG
TACTACGGCT ATCGCTACGT TGTGCCGACC CATCAGGGGC GCGGCGCCGA GCACCTGATC
AGCCGCGCCG CTATCCGCCC CGGGCAGTAT GTTCCCGGCA ATATGTACTT CACCACCACT
CGCCTGCACC AGGAACTGGC CGGCGGCATT TTTGTCGATG TCATCATCGA TGAAGCGCAC
GATCCACAAT CACTGCACCC GTTCAAGGGG AATGTCGATC TGGACAAATT GGAAGCGCTG
ATCCGACGTG AAGGCGCGCA GAATATCGCG TATGTGAGCC TGGCGGGCAC CGTCAATATG
GCGGGCGGGC AGCCGGTGAG CATGGCGAAT GTGCGCGCGG TGCGCAGCCT GTGCGACCGG
TATGGCGTGC GCATCTTTCT CGACGCGACG CGTATGATCG AAAATGCCTT CTTCATCCAG
GAGCGTGAAG AAGGGTATGC GAACCGATCA ATTGCCGAAA TCCTGAAAGA GTTTTGCTCT
TACACCGACG GCGCCTGGAT GAGCGCCAAG AAGGATGCCT TGGTCAATAT CGGCGGATGG
CTGGCAGTTA ACGACGCCGA ATTGTTCGAC GAACTGCGCA ACCTGGTGGT GGTGTACGAA
GGGTTGCACA CCTACGGCGG GCTGGCAGGG CGCGACATGG AAGCAATGGC AGTCGGCATC
GAGGAGTCGG TGCAGGATGA CTACATACGC GCGCGGATCG GGCAGGTGCG CTACCTGGGA
GAACTGCTAA CTGATTGGGA TATTCCGATT GTCCAACCGG TCGGCGGGCA TGCGATTTTC
CTGGATGCGC GCCGCTTCTA CCCGCATATT CCGCAGCGCG AATTTCCGGC GCAGACGCTG
GCGGCTGAAT TATATCTCGA CTCAGGCATT CGTTCGATGG AGCGCGGGAT TGCCAGCGCC
GGACGCGATC CGAAGACCGG TGATCACTAC TATCCGAAAC TCGAACTCAC ACGGCTGACC
ATTCCACGGC GTGTCTATAC CCAGGCGCAT ATGGACGTGG TTGCGGAAGC GGTGAAAGCC
GTCTACGACG CGCGCGCTCA GACCCGCGGA CTGCGCATGG TGTACGAACC GAAGTACCTG
CGCTTCTTTC AGGCGCGGTT CGAGCGATTG GCGTGA
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| Protein sequence | MTHPTPQTMG QQFGRRSWAE PWKIKMVEPL RVTTREERER ALAEAGYNTF LLRSEDVYID
LLTDSGTNAM SDRQWAAIML GDEAYAGSRN FYRLEATIQQ YYGYRYVVPT HQGRGAEHLI
SRAAIRPGQY VPGNMYFTTT RLHQELAGGI FVDVIIDEAH DPQSLHPFKG NVDLDKLEAL
IRREGAQNIA YVSLAGTVNM AGGQPVSMAN VRAVRSLCDR YGVRIFLDAT RMIENAFFIQ
EREEGYANRS IAEILKEFCS YTDGAWMSAK KDALVNIGGW LAVNDAELFD ELRNLVVVYE
GLHTYGGLAG RDMEAMAVGI EESVQDDYIR ARIGQVRYLG ELLTDWDIPI VQPVGGHAIF
LDARRFYPHI PQREFPAQTL AAELYLDSGI RSMERGIASA GRDPKTGDHY YPKLELTRLT
IPRRVYTQAH MDVVAEAVKA VYDARAQTRG LRMVYEPKYL RFFQARFERL A
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