| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0849 |
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| Symbol | |
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| ID | 5538315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1111042 |
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| End bp | 1113195 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893001 |
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| Product | glycosyltransferase |
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| Protein accession | YP_001430984 |
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| Protein GI | 156740855 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0226156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAG TCGAACGAAA CCCTGCGCGC GGCGCGAGCG TATTCCTGGC GCCACAAAGC
GCGCTAACGA TCGGCAGAAC ACTGCTGACT GCCCTGATAC TTGGCACGCT CATGCTCGCG
CCGCGCGCGT TCGGGCTTGC CGATTTTCTA ACGACCGACG AAGCGTACCA CTGGATTCGG
TTCACCGAAC GATTCGATGC TGCGCTCTCT GCCGGTCGCT GGGCAGATAC TATCTACGTC
GGGCATCCCG GCATCACCAT GTTCTGGTTG GGGCGCACCG GGTTAATGAT CGAGCGCATG
GTGCGCGATC TGGGCTGGAT CGGAGCGCCT GCCATGGTCG AGCATCTCGC CTGGTTGCGG
CTGCCGGGCG TGATCCTTCA GGCGCTGTGC GGCATGGCAA CATGGCTCTT GTTGCGCCGC
CTTGTCGATC CGACCGTCGC GCTGGTCGCG TCGTTCCTGT GGGCTACGTC GCCGTATCTG
ATCGCTCATG GTCGGGTCCT CCATCTGGAC GCGCTTCTGA CCGGACTGAT CACGCTGAGC
CTGCTCTTGC TGCTGGTTTC CTGGCGACAA CAACAGGCGG GCAAAGATGG ATGGACCGCG
CTGCTCGGTT CTGGAGCGCT GACCGGACTT GCGTTGCTGA CGAAGGGACC GGCGCTCATT
TTCCTGCCAT TCGCCGGTGT ACTCCTCTTT GCGTTCGCTC CCGCATATAC GGCGACATCC
CGGCATACAG GCGACATACT GCGCCTGGCA TCGGGCATCG CCCATCGCCT GCGGTATGCT
GCTGTGCGCT TCTGCGTATG GTTGGGCATA GCGATCTGTG TGGTCTTCGC GGGATGGCCC
GCGCTCTGGA CGGCGCCGGA CGCAGCGCTT CGCGCATACG CCGATGAAAT CATCTTCAAT
GGCGGACGCC CCAATGGTGA TGGGCAATTT TTCAACGGTC AGGCAATCGA CGATCCCGGC
GTATGGTTCT ACCCGGTCGC CAGCCTGTTT CGCACAACGC CGGTTATGCT GATCGGGTTG
ATCGTGTTCG GCCTCTTCGC CGGTCTGGAC GCCTGGCGTT TCTGGAGGCG AGGCGAAGCG
CCCTTCGATA GCAGATACCG CGTACTTGTC GTCTTCATCG CATTTGCCGC ATTCTGGACC
TTCATGATGA CCCTGGGCGC GAAGAAGTTC GACCGGTATG TCTTGCCCAT CTGGCCCTCA
CTGCTGGTCC TGGCAGCGAC CGGAATCGTG CGCGGGTATG GTGCTGCGCG GGCATGGTTC
GCCCGCCGTG CAACGACGAT ACAACGCGGC GGCGCGTGGC TCGCGCGTAT CCCGCTGGCG
ACGTTGATCG CGCTGGGCGG CGTTGAAGTT GGTCAGGTTA TCTGGTATCA CCCGTACTAC
CTGAGTTACT ACAATCCGCT CCTGGGTGGC GGTCCCGTCG CGCAGCGCAT GGTGCTTATC
GGATGGGGTG AAGGCATGGA TCAGGTCGGA GCGTGGTTGA GCGCCCGCCC TGATATTCGA
TACGGACCGG TGATCTCGGC ATTGCGGCCA ACGCTGCAAC CATTCGTGCC CGTCGATGTC
CGCGACATTA CCGACCTGGG AACATTGCCG GTCAATTACG CCGTTGTGTA CCTGGAGTCG
GTGCAACGGG GCGCGCATCC CGAGATTTAC CGGCAGTTCG AAGCGATGAC GCCGATTCAC
ACGATCACCA TTCACGGGAT CGAGTACGCC AGGATCTATC AGTTGCCGCG TCCATTCGCG
CAACCAATCC ATGCGTGTTT CGGTGATGAG ATTACATTGC ACGGCGTCAC GATCGAAGCC
TCGCCTGATC ATCTGTCGGT GACGCCCTCC TGGGGAGCGC TCGTATCTCC GACGCGCGAT
TACATGGTGT TTCTCCAGAT GATCGACGTA CAGGGGCGGC GTGTCGCCGG TGTTGATGTG
CCGCCCGCCG GAGTTGGCGG ACTGCCTGCG AGCGCATGGC TTGCGGGTCA GCAAGTGGCA
GTGCCGCTGC CGCTGCCGTT GCCGTCTGAC CTGCCGGCCG GAACATATGA GGTCGTCATC
GGTTTGTACG ATGCCAACAG CGGCGAGCGT GCGCCCGTCA GCGGCGGCGT CGCAGCCGAC
CCGGCGCGCG CCGGGCCGCA TGCGCTGCTT TTGACGACGC TGACGCTGCC GTAA
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| Protein sequence | MQRVERNPAR GASVFLAPQS ALTIGRTLLT ALILGTLMLA PRAFGLADFL TTDEAYHWIR
FTERFDAALS AGRWADTIYV GHPGITMFWL GRTGLMIERM VRDLGWIGAP AMVEHLAWLR
LPGVILQALC GMATWLLLRR LVDPTVALVA SFLWATSPYL IAHGRVLHLD ALLTGLITLS
LLLLLVSWRQ QQAGKDGWTA LLGSGALTGL ALLTKGPALI FLPFAGVLLF AFAPAYTATS
RHTGDILRLA SGIAHRLRYA AVRFCVWLGI AICVVFAGWP ALWTAPDAAL RAYADEIIFN
GGRPNGDGQF FNGQAIDDPG VWFYPVASLF RTTPVMLIGL IVFGLFAGLD AWRFWRRGEA
PFDSRYRVLV VFIAFAAFWT FMMTLGAKKF DRYVLPIWPS LLVLAATGIV RGYGAARAWF
ARRATTIQRG GAWLARIPLA TLIALGGVEV GQVIWYHPYY LSYYNPLLGG GPVAQRMVLI
GWGEGMDQVG AWLSARPDIR YGPVISALRP TLQPFVPVDV RDITDLGTLP VNYAVVYLES
VQRGAHPEIY RQFEAMTPIH TITIHGIEYA RIYQLPRPFA QPIHACFGDE ITLHGVTIEA
SPDHLSVTPS WGALVSPTRD YMVFLQMIDV QGRRVAGVDV PPAGVGGLPA SAWLAGQQVA
VPLPLPLPSD LPAGTYEVVI GLYDANSGER APVSGGVAAD PARAGPHALL LTTLTLP
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