| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0848 |
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| Symbol | |
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| ID | 5538314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1109831 |
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| End bp | 1110964 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893000 |
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| Product | patatin |
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| Protein accession | YP_001430983 |
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| Protein GI | 156740854 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00785224 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAG CGCTAGTCCT CTCAGGCGGC GGCGGTCGTG GCGCCTATCA CGTCGGGGTG
ATCGAGGCGC TAGTCGAACG CGGCTGGATG CAGGATGGAA GAGGTCCCGA CATCCTTGCC
GGCACGTCAA TCGGAGCGAT CAATGCCGCA GCGCTGGCGT CGGGTCTGAC CGTCGCTGAA
CTGAAGGCGC GCTGGCTTGA GATGCACACC GAGGATGTGC ATCGGCTATC GAGCGATCTG
CCAACGGTCA GCCGCCCACT TGTTCGCTTC CTGATGCGCA GTGTATTGAC CTCGGAAGCG
CATGGCGGAT CGCCTGCGAT GCTGCCGCCG GAAGAGCGCA AGATGAGCGC CGAAGGATTG
ATCGAGCGCA TCAGCAGCGT TTTTCGTAGC CGACCATTTC GCAGCATGCT CGACACTACT
CCCTGGCGCC ATACGCTAAG CCGCTGGATG GACTTCGAGC GGATCAATGC GCCAGACGCT
CCTGCGCTGT TGCTGACCGC CACCGATCTG CAATCCGGCG ATCTGCGCGT CTTCTGCAAC
CGACCGCTGC GCAACCATCC AGCCGACACC ATCACTATCG AGCATTTGAT GGCATCATCG
AGCATTCCGA CGGTCTATCC GTGGACGGAG ATCGACGGTC GCAAATATTG GGATGGCGCA
ATACTGGCAA ACACGCCGCT GGGACCGGTG ATCGATCTGG CAGCCAGAGA GGATGTCGAG
ATCGTCGTCG TGATGATGAC GCCGTGGGAT GTGGCGCCCG AAGTGATGCG CCAGCAATTG
CAGGAAGTGC CGCAGGACCT GGTGCAGGCA TTGTCGCTGA CGCTTGATTG GGCATTGCTG
GCATCGTATC GCACCGCAAT CAAAACCTTG CGCGCCTACA ATCGACTGGC TGAGGCAATG
CACAAACTTG AACGCGCCGC GCAACAGACC GGCAATCCCG ACTTGCGGAT AGAGGGAAAC
ATTCCGCGTA TCATTACCGA ACCGCTGGTC GTTGCGCCGC AGCAACTTAT GCCGCTGGAG
TGGATTATCG ACTACGAGGA ACACAACCAT CGGACCCTTT TCGAGATGGG GCGCAACGAC
GCGCTGCGTG CGCTCGACAA CCGTCTGCTC GACCGCCTGC TCGACCAGCC ATGA
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| Protein sequence | MKKALVLSGG GGRGAYHVGV IEALVERGWM QDGRGPDILA GTSIGAINAA ALASGLTVAE
LKARWLEMHT EDVHRLSSDL PTVSRPLVRF LMRSVLTSEA HGGSPAMLPP EERKMSAEGL
IERISSVFRS RPFRSMLDTT PWRHTLSRWM DFERINAPDA PALLLTATDL QSGDLRVFCN
RPLRNHPADT ITIEHLMASS SIPTVYPWTE IDGRKYWDGA ILANTPLGPV IDLAAREDVE
IVVVMMTPWD VAPEVMRQQL QEVPQDLVQA LSLTLDWALL ASYRTAIKTL RAYNRLAEAM
HKLERAAQQT GNPDLRIEGN IPRIITEPLV VAPQQLMPLE WIIDYEEHNH RTLFEMGRND
ALRALDNRLL DRLLDQP
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