| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0842 |
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| Symbol | |
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| ID | 5538308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1102445 |
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| End bp | 1104826 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892994 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_001430977 |
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| Protein GI | 156740848 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000826759 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGCTG AAACGATGCC AACGAGGCTG GTGGGTCAGG CGATTAAGCG TCGTGAAGAC
CCACAATTGA TCACAGGACA GGGCAGCTTC CTCGACGACA TTAAACTTCC GGGCATGACA
CACGCCTGTG TGTTGCGCAG CCCCTATGCC CACGCAAAGA TCAAATCCAT CGATACGAGC
AAGGCGAAAG CCCATCCGGG GGTGGTTGCC GTCTTCACCG GCGAAGATAT GCTCGACCTC
AATCCGCTGC CGTGCGCCTG GCAGGCAGGG CGCGTGAAGA ACAATGTCAA CACGCCGCGC
GTCCTGGCGG TCGGTGAGGT GCATTTCGCC GGTGATCCGG TTGCGCTGGT GATCGCCGAG
GATCGCTACA TCGCGCGCGA TGCCTGCGAC TTGATCGAAG TCGAGTATGA GCCGCTGCCG
GTGGTGGTGG ATGCCAAAAA AGCCACCGAG CCGGGTGCGC CGCAACTTCA CGAGAATGCG
CCGAACAATA TTGTGATGGA ATGGGATGCG GGCGATAAGG CGAAAGCCGA TGCCGCCATC
GCCGCCGCCG AAGTAGTGGT GCGCGAGCAG ATTATCAATC AGCGCCTCAT TCCGACGCCG
ATGGAAACCC GTGGCGCGAT TGCGCGCTAT GAGCAGGCAA CCGGTGAGTT CACCCTTTGG
ACAACTTCGC AGGCGCCGCA CGTCATGCGG CTGTTGCTGA CGGCGTTTGT CTTCGGTATT
CCCGAAACGA AACTGCGTGT CATTTCGCCA AACGTCGGCG GCGGGTTTGG GCAGAAGATT
TTCTGCTACA ACGACATGGC CTTCACGATG TGGGCGGCGC GCAAAATCGG GCGTCCGGTG
AAGTTCGTCG AAGACCGGAG TGAAAATTAC AAGTACTCGA CCCATGGGCG CGATCATATC
ACCGACGTTG AAATTGCCGG CACCCGCGAC GGCGCCATCA CCGGGCTGCG CGTCACCACC
TATGCCAACC TTGGCGCTTA CCTCAGCACA ATTGCGCCTG GCATTCCGAC GACGCTCTAC
GGCCGGATTA TCACCGGCGT CTACCGCATT CCCGCAGCCT ATGTCAAAGT ATACGGCGTT
TACACCAACA CGGCGATGGT CGATGCCTAC CGCGGCGCCG GTCGTCCCGA AGCGTCGTAC
CTGATCGAAC GCATGGTCGA TCGCTTCGCC GCTGAAATCG GGATGGACCC GGCAGAGGTG
CGGCGCAAGA ACTTCATTCC ACCCGATGCG TTCCCCTACG ACAATGGCAT GGGTCTGCTG
CCGTATGACA GCGGCAACTA CGAAGCAGCG CTCAACAAGG CGCTCGACAT CATCGGGTAC
GCCAACTTCC GCAAGGAACA GGAAGAGGCG CGCAAACATG GCAGATACCT GGGACTCGGC
ATCAGTTCGT ATGTCGAAAT CTGCGGCGTG GCGCCAAGTA AATGGATTGG TCTTCCCGGC
GAAGGGTGGG GCGCCGGTCT ATGGGAGAGC GCCAATGTGC GCATTCACCT GACCGGCAAA
GTTGTCGTGA CGACCGGGTC GCTCCCGCAC GGGCAGGGTG TCGAAACGAC TTTCGCGCAG
ATCGTTGCCG ATGAACTTGG CGTGCCGTAT GACGATGTGG TGATCGAGCA CTCCGACACA
GCCGGTACGC CGTTCGGCTA CGGCACCTAT GGATCGCGCT CGCTGGCGGT CGGCGGCACA
GCAGTCTACC GCAGTGTGGC GAAGATCAAG GAAAAGGCAA AGAAACTCGC CGCGCACATG
CTCGAAGCCA ATCCCGACGA CATGGTGTAC GAGAATGGGC GTGTCTACGT CAAAGGATCG
CCCGACCGCG CCAAGACGCT GGCGGAGATT GCGCTTCAGG CATCGGTGGC ATACGACCTG
CCGGAAGGTA TGGAGCCATT CCTCGACGAA ACCAGCTACT ACGATCCGCC GAACTGCACC
TTCCCCTTCG GCACGCATAT TGCCATTGTC GAGGTGGACC CGGACACCGG CATCGTCGAT
CTGAAGCGCT ACGTGGCGGT CGATGACTGC GGCAATGTCA TCAACCCGCT GATTGTCGAT
GGTCAGATTC ACGGCGGCAT TGCCCAGGGG GTGGCGCAGG CGCTCTACGA GCGCGCTGTG
TACGATGAGA ACGGGCAACT CGTCAGCGGC ACCCTGATGG ACTATGCCGT GCCCGCAGCG
CATATGCTAC CGCCGTTCGA GACAGATCGC ACCGTCACTC CCAGCCCGGT CAACCCAATG
GGGGTGAAGG GCGCGGGCGA AGCAGGGACG ATCGCCAGTG CGCAGGCGGT GATGAACGCC
GTGATCGACG CACTCTCGCC ATTTGGCGTC AAACACATGC AGATGCCGGC GACGCCGGAG
AATGTGTGGA AGGCGATCCG CGCCGCGCAG ACGGCTTCCT GA
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| Protein sequence | MTAETMPTRL VGQAIKRRED PQLITGQGSF LDDIKLPGMT HACVLRSPYA HAKIKSIDTS
KAKAHPGVVA VFTGEDMLDL NPLPCAWQAG RVKNNVNTPR VLAVGEVHFA GDPVALVIAE
DRYIARDACD LIEVEYEPLP VVVDAKKATE PGAPQLHENA PNNIVMEWDA GDKAKADAAI
AAAEVVVREQ IINQRLIPTP METRGAIARY EQATGEFTLW TTSQAPHVMR LLLTAFVFGI
PETKLRVISP NVGGGFGQKI FCYNDMAFTM WAARKIGRPV KFVEDRSENY KYSTHGRDHI
TDVEIAGTRD GAITGLRVTT YANLGAYLST IAPGIPTTLY GRIITGVYRI PAAYVKVYGV
YTNTAMVDAY RGAGRPEASY LIERMVDRFA AEIGMDPAEV RRKNFIPPDA FPYDNGMGLL
PYDSGNYEAA LNKALDIIGY ANFRKEQEEA RKHGRYLGLG ISSYVEICGV APSKWIGLPG
EGWGAGLWES ANVRIHLTGK VVVTTGSLPH GQGVETTFAQ IVADELGVPY DDVVIEHSDT
AGTPFGYGTY GSRSLAVGGT AVYRSVAKIK EKAKKLAAHM LEANPDDMVY ENGRVYVKGS
PDRAKTLAEI ALQASVAYDL PEGMEPFLDE TSYYDPPNCT FPFGTHIAIV EVDPDTGIVD
LKRYVAVDDC GNVINPLIVD GQIHGGIAQG VAQALYERAV YDENGQLVSG TLMDYAVPAA
HMLPPFETDR TVTPSPVNPM GVKGAGEAGT IASAQAVMNA VIDALSPFGV KHMQMPATPE
NVWKAIRAAQ TAS
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