Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0835 |
Symbol | |
ID | 5538301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1095928 |
End bp | 1096521 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640892987 |
Product | hypothetical protein |
Protein accession | YP_001430970 |
Protein GI | 156740841 |
COG category | [S] Function unknown |
COG ID | [COG3815] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.911593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000352254 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATACTGA TTATGACGAT CAATCCTCCA TCTTATTCTG CACCCTGGAT CGATCGGGCG GTCGCCTGGA TGTTTCGCCG CTGGCTTCTG ATCGTCAACG GTCTCCTTGG TATCTACGCA GGGTTGCCGT GGTTGTCGCC GTGGCTCAAG GCGAATGGTC ATCCGCTGGC GGGTGAGATT ATTTTCCGCA TTTATACACC GTTGTGCCAT CAGCGCCCTG AGCGTTCGTT CTGTTTCTGC GGCTATCAGG TGGCGTTCTG TCATCGCTGC ACATCGTTCT ACGGCGGGTT GTTCATCGCT GGCATGCTGT TTTCCTTTGC GCGGCGCTGG ATTCGACCAG TTTCGCTGCG CTTCGGCGTA TTTCTGCTGT TGCCGATGAC GCTCGATGCC GGTTCTCATA TGATCAACGA CATCCTGCAC CTTGGTTGGC GGAGCGGTGG CGATGACATT GGCTCGCTCA ACTTCTGGCT GCGCATAATC ACCGGCGCGT TGGCAGCGCT GGCAGTGCTG CTGGTCGTCT ACCCGCGGCT CGACCGTGAA CTTCCGGCGC AGGCGCCGCT CATTGGGTCG CCAGGAACCT ATGAGGCAAC GTGA
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Protein sequence | MILIMTINPP SYSAPWIDRA VAWMFRRWLL IVNGLLGIYA GLPWLSPWLK ANGHPLAGEI IFRIYTPLCH QRPERSFCFC GYQVAFCHRC TSFYGGLFIA GMLFSFARRW IRPVSLRFGV FLLLPMTLDA GSHMINDILH LGWRSGGDDI GSLNFWLRII TGALAALAVL LVVYPRLDRE LPAQAPLIGS PGTYEAT
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