Gene Rcas_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0835 
Symbol 
ID5538301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1095928 
End bp1096521 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content58% 
IMG OID640892987 
Producthypothetical protein 
Protein accessionYP_001430970 
Protein GI156740841 
COG category[S] Function unknown 
COG ID[COG3815] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.911593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000352254 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATACTGA TTATGACGAT CAATCCTCCA TCTTATTCTG CACCCTGGAT CGATCGGGCG 
GTCGCCTGGA TGTTTCGCCG CTGGCTTCTG ATCGTCAACG GTCTCCTTGG TATCTACGCA
GGGTTGCCGT GGTTGTCGCC GTGGCTCAAG GCGAATGGTC ATCCGCTGGC GGGTGAGATT
ATTTTCCGCA TTTATACACC GTTGTGCCAT CAGCGCCCTG AGCGTTCGTT CTGTTTCTGC
GGCTATCAGG TGGCGTTCTG TCATCGCTGC ACATCGTTCT ACGGCGGGTT GTTCATCGCT
GGCATGCTGT TTTCCTTTGC GCGGCGCTGG ATTCGACCAG TTTCGCTGCG CTTCGGCGTA
TTTCTGCTGT TGCCGATGAC GCTCGATGCC GGTTCTCATA TGATCAACGA CATCCTGCAC
CTTGGTTGGC GGAGCGGTGG CGATGACATT GGCTCGCTCA ACTTCTGGCT GCGCATAATC
ACCGGCGCGT TGGCAGCGCT GGCAGTGCTG CTGGTCGTCT ACCCGCGGCT CGACCGTGAA
CTTCCGGCGC AGGCGCCGCT CATTGGGTCG CCAGGAACCT ATGAGGCAAC GTGA
 
Protein sequence
MILIMTINPP SYSAPWIDRA VAWMFRRWLL IVNGLLGIYA GLPWLSPWLK ANGHPLAGEI 
IFRIYTPLCH QRPERSFCFC GYQVAFCHRC TSFYGGLFIA GMLFSFARRW IRPVSLRFGV
FLLLPMTLDA GSHMINDILH LGWRSGGDDI GSLNFWLRII TGALAALAVL LVVYPRLDRE
LPAQAPLIGS PGTYEAT