| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0833 |
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| Symbol | |
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| ID | 5538299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1092597 |
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| End bp | 1094765 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892985 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001430968 |
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| Protein GI | 156740839 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.357142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000104285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATCGCTG GAGAGACCCT GACCCGGCAG TTGCCCTATT GGCTGGTTGA ACGCCGCGAA
CATCTCACGC ATCTTTTTGC GCCTGTGCCT GCGCTCGCGC TGGTTCTGTG GCTATCGCTC
GCTGCGCTTC CCGACACACT CTGGATGGCG CTGATCGGGT ATGCAGCGGT CCACTTGTTC
CTGTTCTGGA TGGCGTATGG CCGTCCTACC GGCAATGCCG CGCGATTGCC ACATGCCGAT
TGGGCGTCGA TCCTGGTCGA CGCGGCGCTG AGCATTGTCG TGATCAGCAA CCCCACCTCA
CTGTTGCACT TTCTGCCGGT GTATGTGCTC ATTGCATGGC GCGCCGTCGC CGGGTACCGT
CGCAACCAGG CGACAACGAT GATCGTGTTT GTGCTGGGAC CGATCTTCTT GTTCCAGTCG
CTGCTGAACC GGACCGGCAA TACGGCGCTG ACGCCAGGGG AGCAGTGGGG TGCAGCCAGC
ATTCTTGCGG GGAGTCTGGG ATGCGGCATC GTCGCCGTTC TGGCGAGCGC GCGGCAACAG
GCGTCGATCC ATCAGTTGCG GAGCGAGTTG CAACGCGAGC GGAACACGCG CGAAGCGCGC
GTCGAAGAAC TCGAGCATCT GGCGAATGAA CTGCGGATGC GCATGCGTGA GCGCCACGCG
CTCGAAGAAG GGTTGCGCGC CATCACCAGC ACCCTCAGTC TCGACGATGT GCTGGAGCAG
ATTCTGGATA GCACTGTGCA GACGTTTGGC GGCGAACGCA CCCATGCGGT CGTGCTCACG
CTGAAGACCG ATGGCTCGTG GAACAACCGC ATGTATGCGC GCGATGGTCA ACTCCAGGCG
CAATGGGTCG AACCGATCAT TCGCCGCGTC ATGCGTGATC AGACGCCAGC CGTGATTGCC
GACTCAGCGC TCGACCCCGA TCTTGGAGAG ATGAGCAAGA TCGGGCTGCG TTCGATCATT
TGCGTCCCCC TCTTCGTCGG CGATGGTCCG CCGCGCGGCG CACTCACCGT CGTGAGTGCC
ACATTCGCAG CCTTCTCCAG CAGTGATGCG CGCCATCTCT CGGCATTCGC CGCTCAGGCC
GGCATTGCGA TTGGCAATGC TGAATTGCAC AGTCAGCTGC GCCGACAGCA GCACCTGCTC
CAGGCAGTGC TCCGTGACAT CAATGACGGA TTGGTCGTGC TCGATACCGA GAACAATGTC
GTGCTGGCCA ATCCGGTTGG GCAGGCGCTC CTCGATGACC AAACGGCGTC GCAGCCCTGG
CTGGAACGCA TGCGCGAACT GGCAAGCCGC CTCTCCGACG ACGGTCGCCC GGTGGCGTCG
CCTGAATGGA TCGTTGGCGA CCCGGAGTGT GAGGAAGGGT GCATCGTCTA CCAGGCTGTT
GCGTCACGGG TGCGCATGAA CGACGATCTG CCCAATCTGA CAGCGATTGT GCTGCACGAC
ATCACCGATC ACAAAGCGGA AGAGCGCGCG CGCATGGATT TTATTTCGAT GGTGTCGCAT
GAACTGCGCA ACCCGCTCCA TACACTCAAT GGCTTCGTCA AACTGGTGCT GCAAGGGCGC
GCAGGTCCGC TGACGGCGTT GCAGAAGGAT TTCCTGTCAA TGGCCGATGA GCAGATTGAG
CAGTTGAGCG GGCGCGTGTC CGAATTGCTG GAATACAACC GCTTCAAAGC CGGACGCCTG
GCACTGCACC CCGATGTCGG CGATCTTTCG CTGCTCATTG CGGGAACGGT GAGCCGATTG
AGCCTGCAAG CTGAACAGCA GCAACTGTCA CTCGTCAACG AGACGCCACA TCTGCCACTG
TGTCGGTTCG ATAACCAGCG CATTGGTCAG GTGTTGACCA ATCTGATCGA AAATGCGATG
AAGGCAACGC CAGCGGGTGG TACGATCAAG ATATCCGCCG ACGTTCATGA TCAAGAAGTG
TGGGTGCGCG TCTCCGATAC AGGGATTGGC ATTCCATCCA GCGAACTGGG CAAGATCTTT
CAGCGTTTCT ATCAGGTAGC GAAGCACCGC CGCGCTCAGG GAACCCATAT GGGTCTGGGG
CTGGCTATCT GTCAGCAGAT TGTCGAAGGT CACGGCGGGC GCATCTGGGT CGAAAGCGAA
GAAGGCGTTG GGACAACATT TACGTTCACG TTGCCGCTGG CAGTCGATGA AAACCACATT
GCCGGGTAA
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| Protein sequence | MIAGETLTRQ LPYWLVERRE HLTHLFAPVP ALALVLWLSL AALPDTLWMA LIGYAAVHLF
LFWMAYGRPT GNAARLPHAD WASILVDAAL SIVVISNPTS LLHFLPVYVL IAWRAVAGYR
RNQATTMIVF VLGPIFLFQS LLNRTGNTAL TPGEQWGAAS ILAGSLGCGI VAVLASARQQ
ASIHQLRSEL QRERNTREAR VEELEHLANE LRMRMRERHA LEEGLRAITS TLSLDDVLEQ
ILDSTVQTFG GERTHAVVLT LKTDGSWNNR MYARDGQLQA QWVEPIIRRV MRDQTPAVIA
DSALDPDLGE MSKIGLRSII CVPLFVGDGP PRGALTVVSA TFAAFSSSDA RHLSAFAAQA
GIAIGNAELH SQLRRQQHLL QAVLRDINDG LVVLDTENNV VLANPVGQAL LDDQTASQPW
LERMRELASR LSDDGRPVAS PEWIVGDPEC EEGCIVYQAV ASRVRMNDDL PNLTAIVLHD
ITDHKAEERA RMDFISMVSH ELRNPLHTLN GFVKLVLQGR AGPLTALQKD FLSMADEQIE
QLSGRVSELL EYNRFKAGRL ALHPDVGDLS LLIAGTVSRL SLQAEQQQLS LVNETPHLPL
CRFDNQRIGQ VLTNLIENAM KATPAGGTIK ISADVHDQEV WVRVSDTGIG IPSSELGKIF
QRFYQVAKHR RAQGTHMGLG LAICQQIVEG HGGRIWVESE EGVGTTFTFT LPLAVDENHI
AG
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