Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0832 |
Symbol | |
ID | 5538298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1091275 |
End bp | 1092477 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892984 |
Product | hypothetical protein |
Protein accession | YP_001430967 |
Protein GI | 156740838 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00828408 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000677471 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGAAGATCG CTCTGGTTGC CCTGCCACCT CTGGATGAGT CGCGCGCAAC GCCCCCCTTG CCGTTGTGCT ACCTGGCGGC ATTTCTCGAG CAGCAGCGCC ATATCATTCG AGTGTATGAT CTGGCGCTCC ATCGCAGTGA TCTGCACACG AGCCACATTG ATGCGGTGCG CGCATTTCGA CCCCAGATCA CCATTGTCGC TGCCGATAGC GTCGCGGATG CGATAGGTCC TACAGAACGA TTGCGAACCA CAGGGCTGGT GTTGCCGCTG ACGCTGGGGG TACGCAATCA TCTCCCTCCA TGGCTCGCTT CGCGAGCGCT CGCTGAACTC AATCGACTGC TGCCGCATGC ATCCGATATC AAGAATCTGG TTGCATGCGG GCTGCTGGCG CTCGATGAAT CGCTCGACAA CCTGCCCTTT CCAGCCCGTC ATCTGCTGCC GCTCGAACAG TACCCGCTGG TTACGCCAGA AGATGAGTTA TGCACAACCG TCTTGATTGG GCGAGTTTCC AGAGATGGCG CCCGTGTCTT TCGGCAGCCT GCACTGCTGG GCGCCGAACT CCGATCCATC GTTCAGGAAC ACGGCGTGCG TCACGTTCTT CTTGAGGGGC TGGCGCTCAC CGACGACCGC GATTGGCTGT ACGCCTTCTT ATCGCAGATC TCCTCTATGC ACCTGGGCAT CAAATGGGAA GGTCGCGTGT CGCACTCGCA CCTGACCGGC AGCCTGATAG AAGCAATGCA GCGCTCCGGT TGCGAGGCGT TGACGTTTGA ATTTGCGGCG CTCTCGGTCC TCGATGCGAA GCATGAACGC GATGCACTGA TTGCCACCGT GCGGCAGGCG CGCGACCTGG GAATGCGCGT CCATGGGCGC ATCGCCCTCG ATCCACACTA CCCCTCGATC CCGGCGGTTG TTGATATGTC GGCAACCTTC GGGCTGGATG AAGTGCGCTT CTTCGTGCCG AAGGACGCAG AAGCGCCAAT CGAGAGTGAC GAGGCCGCAG AGATCGCGGA CCTCATCGCG CGCGCCCGTG AGCATTATCA GATCAGCCTC GGTCGTCAGT ATTTCATTGA TCGGTTTGGC GTTCGTCTCG GAACGATGAT CTGGTATGTT GGTCGGACGG GGTTGCTCGG CAGACGCTGG CAGCGCCATA TGCAACCCGA TGAATCGGCT TCCGCAGGTG TGCTTGAGCA TGGGAGGGGC TAG
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Protein sequence | MKIALVALPP LDESRATPPL PLCYLAAFLE QQRHIIRVYD LALHRSDLHT SHIDAVRAFR PQITIVAADS VADAIGPTER LRTTGLVLPL TLGVRNHLPP WLASRALAEL NRLLPHASDI KNLVACGLLA LDESLDNLPF PARHLLPLEQ YPLVTPEDEL CTTVLIGRVS RDGARVFRQP ALLGAELRSI VQEHGVRHVL LEGLALTDDR DWLYAFLSQI SSMHLGIKWE GRVSHSHLTG SLIEAMQRSG CEALTFEFAA LSVLDAKHER DALIATVRQA RDLGMRVHGR IALDPHYPSI PAVVDMSATF GLDEVRFFVP KDAEAPIESD EAAEIADLIA RAREHYQISL GRQYFIDRFG VRLGTMIWYV GRTGLLGRRW QRHMQPDESA SAGVLEHGRG
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