Gene Rcas_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0831 
Symbol 
ID5538297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1090658 
End bp1091092 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content54% 
IMG OID640892983 
Producthypothetical protein 
Protein accessionYP_001430966 
Protein GI156740837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000499986 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000401336 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCTGTGT TCAAGGACTA TGCCGAGCTT CATCAGTGTC TGAGTACATT GTATGATCAG 
GCGAAGTGCG ACGCTCGCAT TGCGCCGAAG ATCCGCGACT CGCATCTCGT GATCCAGTTC
CGCTACGAAG ATCCGCGCGC AGTAGTGACG ATTAACGCCG CTGCGCCGCC AACACAACCA
GGGGCGTATT TCGATGTTTT GTGGGGTGAC GATACCGGGT TGAAGCCGGA TGTCGAAATG
AGTATGAAAG CCGACATTGC CCATCAGTTC TGGCACGGCA AAATCAACCT GATGACCGCG
CTGGCGCGGC GTCAGATTAT TGCTAAGGGT CCCATCCCCA AAATACTCAA GTTGTTGCCC
GCTGTTGAGC CTATGTACGA AATGTATCCG CGCCTGTTGC GCGAGATGGG ACGCGCCGAT
CTTGTGTTGA CATAG
 
Protein sequence
MPVFKDYAEL HQCLSTLYDQ AKCDARIAPK IRDSHLVIQF RYEDPRAVVT INAAAPPTQP 
GAYFDVLWGD DTGLKPDVEM SMKADIAHQF WHGKINLMTA LARRQIIAKG PIPKILKLLP
AVEPMYEMYP RLLREMGRAD LVLT