Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0830 |
Symbol | |
ID | 5538296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1089724 |
End bp | 1090434 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640892982 |
Product | hypothetical protein |
Protein accession | YP_001430965 |
Protein GI | 156740836 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000258366 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000542713 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGAACGTTC ACACCACGGT CGCCTGGTGT GTTCGCCAAT GGTCGTGCAT GGTGGAGGCC TGGCACAAAC GATGGCGCTG GTCGCGCGCT TCACGAAAGC CAATGAGCAG CGAAGACATG TACGAACGAG GGGTGGCGGA CGCTGAGCGC GGTGAGTTGC ACCCGTTCTA TTACCAGCAT TACTACCACT ACCGCCGAGG CTACGATCAG GCGCGTCGCC GTATGCGCCG CCCGTTCTGG ACTACGTTGT TGCCTGGTCG CCATGCGGTG CTGATTGGGG GAGCAACGCT TACCATTGCC CTGATCGTCA TCATTGGCGG CATCTGGCGC AACAACGAAA AGACCGACGC TGCCCTCCTC GCAATGCCCG CCACCGACAC GGTTGTAACC GCAACGGCGC GTCCCACGCG CACACCGCTG TTTCCCACTG CTACGCCAGA AGCAACGCCT GAGCCGGTTG TAGTGACCCT GCGCGTCAAT GGATTTGCAC AGGTGGCGAA CACCGAGGGA CGCGCCCTGC GCGGACGCGC CGCGCCAGGC TTGAAAGCGC CGGTACGAGT GGCGTTCGCA GAAGGGGAGC GTGTGCGCAT CCTGGAAGGA CCGGTTCTTG CCGATCAGTA TATCTGGTGG CGGGTCGAAG GACGCGCCGG AACGGGTTGG GCAGCGCAGC AATCGCTCGA AGGCGTGGTC TGGCTCATAC CGGTGGAGTG A
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Protein sequence | MNVHTTVAWC VRQWSCMVEA WHKRWRWSRA SRKPMSSEDM YERGVADAER GELHPFYYQH YYHYRRGYDQ ARRRMRRPFW TTLLPGRHAV LIGGATLTIA LIVIIGGIWR NNEKTDAALL AMPATDTVVT ATARPTRTPL FPTATPEATP EPVVVTLRVN GFAQVANTEG RALRGRAAPG LKAPVRVAFA EGERVRILEG PVLADQYIWW RVEGRAGTGW AAQQSLEGVV WLIPVE
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