Gene Rcas_0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0830 
Symbol 
ID5538296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1089724 
End bp1090434 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content63% 
IMG OID640892982 
Producthypothetical protein 
Protein accessionYP_001430965 
Protein GI156740836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000258366 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000542713 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGAACGTTC ACACCACGGT CGCCTGGTGT GTTCGCCAAT GGTCGTGCAT GGTGGAGGCC 
TGGCACAAAC GATGGCGCTG GTCGCGCGCT TCACGAAAGC CAATGAGCAG CGAAGACATG
TACGAACGAG GGGTGGCGGA CGCTGAGCGC GGTGAGTTGC ACCCGTTCTA TTACCAGCAT
TACTACCACT ACCGCCGAGG CTACGATCAG GCGCGTCGCC GTATGCGCCG CCCGTTCTGG
ACTACGTTGT TGCCTGGTCG CCATGCGGTG CTGATTGGGG GAGCAACGCT TACCATTGCC
CTGATCGTCA TCATTGGCGG CATCTGGCGC AACAACGAAA AGACCGACGC TGCCCTCCTC
GCAATGCCCG CCACCGACAC GGTTGTAACC GCAACGGCGC GTCCCACGCG CACACCGCTG
TTTCCCACTG CTACGCCAGA AGCAACGCCT GAGCCGGTTG TAGTGACCCT GCGCGTCAAT
GGATTTGCAC AGGTGGCGAA CACCGAGGGA CGCGCCCTGC GCGGACGCGC CGCGCCAGGC
TTGAAAGCGC CGGTACGAGT GGCGTTCGCA GAAGGGGAGC GTGTGCGCAT CCTGGAAGGA
CCGGTTCTTG CCGATCAGTA TATCTGGTGG CGGGTCGAAG GACGCGCCGG AACGGGTTGG
GCAGCGCAGC AATCGCTCGA AGGCGTGGTC TGGCTCATAC CGGTGGAGTG A
 
Protein sequence
MNVHTTVAWC VRQWSCMVEA WHKRWRWSRA SRKPMSSEDM YERGVADAER GELHPFYYQH 
YYHYRRGYDQ ARRRMRRPFW TTLLPGRHAV LIGGATLTIA LIVIIGGIWR NNEKTDAALL
AMPATDTVVT ATARPTRTPL FPTATPEATP EPVVVTLRVN GFAQVANTEG RALRGRAAPG
LKAPVRVAFA EGERVRILEG PVLADQYIWW RVEGRAGTGW AAQQSLEGVV WLIPVE