| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0829 |
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| Symbol | |
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| ID | 5538295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1087455 |
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| End bp | 1088735 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892981 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001430964 |
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| Protein GI | 156740835 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000111783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000756922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACATCGC GTTCACCACG ACTCTTTATT TTCCTTACGG TGCTGATCGA TCTCCTCGGC
GTCGGCATTG TGTTGCCGCT CATGCCCTAC TATGTCAAAA TCGTGGAGCA GTCGAGCATT
CCATGGCTGG CAGCCAACCG CGCAATGATT GTCGGCGCGT TAATGGCATC GTTTGCACTG
ATGCAGTTCT TGTTTGCACC AGTGCTCGGC GCCCTCTCCG ACCGGTATGG ACGGCGGCCA
ATCCTGCTCC TCAGTCTGGT GGGCAGCGCC CTTTCGTATA CGTTGTTCGG CATGGCGGAA
TATCTCTCGT TCCTGGGAGT TGAAACCGTT CTGGCAATCC TCTTTCTCGG CCGTATTCTG
AGCGGTATTA CCGGGGCGAG CATCTCGACC GCGCAGGCGT ATATTGCCGA TGTGACCACC
CCCGAAGAGC GGGCGAAGGG GATGGGCATG ATCGGGGCAG CGTTCGGTCT GGGGTTCATG
CTCGGTCCGG CGCTCGGCGG GTTGTTGAGC ACGGTCAATC TGGCGCTGCC CGCGTTTGTT
GCAGCGGGGC TGGCGTTGGC GAATGTGGGC TTCGGCTACT TCAACCTGCC AGAGTCTCTG
CCACGTGAGC GCCGAACGGT TACGTCGGTG CGTGGCGTCA ATCCGCTGGA GCGGGTGAGC
GCGCTGCTGC GGCGCGCAAG CATTCGGCCA TTGCTGATCG GTGTGCTCAT GCTCAACCTG
GCGTTCGCCA GCCTGCAAAG CAATTTTGCT GTGTTCAGCG ATGTGCGCTT TGGGTTTGGA
CCGCTCGACA ACGCGTTGAT CTTCACGCTG GTCGGGTTGC TGGCCGTTCT AATGCAGGGC
GTTCTCATCC GTCGCCTGGT GCTTGCTTTC GGTGAAGCGC GGCTCGTCAT CGCCGGAATG
GCGCTTATGT CTCTCGGGTT TGTTGCGATC GCCGTTGTGC CACAGGCCTG GATGCTCTTT
CCGGTGATTG GCGTGGTGGC GATTGGGAGT GGTATGGCGA CGCCATCGCT CACCAGCCTG
ATCTCACGCC GGGTCGCCGC TCACGAGCAG GGCATGACCC TCGGCGGCAC ACAGGCGCTG
ACGAGCCTGG CGATGATCAT CGGTCCGATC TTCGCCGGTG TGACCTTCGA TAGCATCGGC
GCCGGAGCGC CATACTATCT GGGAGGCATT CTGATTGCTG CGGCGATCAC GGTCGTCGGT
TCGGCGCTGC TGCCCATGAT CCGGCAGCGG GTCGAACAAC CGCAGGGAAG CCTGGTCGTC
GGGCGCATGG AAACGGAATG A
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| Protein sequence | MTSRSPRLFI FLTVLIDLLG VGIVLPLMPY YVKIVEQSSI PWLAANRAMI VGALMASFAL
MQFLFAPVLG ALSDRYGRRP ILLLSLVGSA LSYTLFGMAE YLSFLGVETV LAILFLGRIL
SGITGASIST AQAYIADVTT PEERAKGMGM IGAAFGLGFM LGPALGGLLS TVNLALPAFV
AAGLALANVG FGYFNLPESL PRERRTVTSV RGVNPLERVS ALLRRASIRP LLIGVLMLNL
AFASLQSNFA VFSDVRFGFG PLDNALIFTL VGLLAVLMQG VLIRRLVLAF GEARLVIAGM
ALMSLGFVAI AVVPQAWMLF PVIGVVAIGS GMATPSLTSL ISRRVAAHEQ GMTLGGTQAL
TSLAMIIGPI FAGVTFDSIG AGAPYYLGGI LIAAAITVVG SALLPMIRQR VEQPQGSLVV
GRMETE
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