Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0825 |
Symbol | |
ID | 5538291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1083158 |
End bp | 1084540 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640892977 |
Product | phosphotransferase domain-containing protein |
Protein accession | YP_001430960 |
Protein GI | 156740831 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.360487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000114157 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | GTGCTCGTCA CTCCTGACTG TAAGATTGAA CGAGGTATGC TCAACATATT CGACGGCGTT CTGACGGAAC GCGACTGGAA GCGTCATCTC AGCCATACAT TCGAGGTTCC TGACGGTGCG ACCCGGCTCT TCATCCGGTT GCGCTTCGAT CCCCCGGTGG TCGATGGGAT CGCCAACATG CTCTGCCTTT CGCTCTTTGA CCCAAACGGA TTCCGTGGCG CCGGGCATCG CGGCGGCGCC CAACACGATG TCGTCATTGA TGGCGCGGAC GCAACTCCCG GTTACCTGCC CGGTCCGTTG CCGGCCGGCG TGTGGGACGC CGTGATCGAT ACGCATATGG TGGTTCCCGG AACGCCCTGT CGTTACACAC TCGAGATTCA GACGACGGAT GAGCCGGTCG CGGAACCTCT GCCGTCACCG GCGCCTCCAT CGGTGAAGAC GCCGGGACGC GGCTGGTATC GTGGCGACCT CCACGCACAC ACGATTCATT CGGATGGTGA ATGGGACATT CTCGCTCTCC TGGAAGCCGC GCGCGCTCGG CGCCTCGATT TTGTGACGCT CACCGACCAT AATACGATTT CGCAACTCCG CCACATCGAT GCCCTGACCA CCAACGACCT GCTGGTGATG GGGGGAATGG AACTCACCAC GTTCTGGGGG CACGCATTGA GCCTGGGAAC GCGTCGCTGG ATCGACTGGC GCATTCGCCC CAGTGAACGG AGTATGCCGC AGATTGCCGC CGATATCGAA AAGGAAGGCG GACTGTTCGT CATTGCGCAC CCACTCGCGC CCGGCGACCC CTACTGCACC GGCTGTGACT GGCGGTATGT CGAAATGATG CCGGGCACGG CGCGCGCCGT CGAGGTATGG AATGGCTTGT GGCACGGCGA CAGCAACAAT GAAGCGGCGC TCGCACTCTG GTATGAATGG TTGAACTGGG GGCTGCACCT GACGGCAACC GCCGGAACCG ATGCGCATGG TCAGGCGCCG CCAGAAGTGC GACCTGGTTT CAATGTCGTC TATGCGGCAC ATCGTAATGA AAGCGCAATT TTGCGCGCTA TTGCGCACGG CAGACTCTAC CTGAGCAGCG GCCCAGTGCT CGAATTGACG GGCATGAGCG GTGAGACTCA CACGATGATA GGGGGCACGC TTCCCAGAGG CGCTGCGACG ATTCACGCCC GCTGGTGCGA CGTTCCTGCC AATGCGCGAC TGCGTCTGAT CGCCAATGGT GCACAACTCA GCGAAGACAT CGCCACGCCT GAAGGAGAGC GCACCTGGAA CCTGGAAGAA GGCGCCGCGC AGTGGTGCGT CGCCGAGATC CGCGCAGCGG ACGGCGAGAT GCTGGCAGTG ACGAATCCGA TCTACTTCGC TCCTGAAGAG TGA
|
Protein sequence | MLVTPDCKIE RGMLNIFDGV LTERDWKRHL SHTFEVPDGA TRLFIRLRFD PPVVDGIANM LCLSLFDPNG FRGAGHRGGA QHDVVIDGAD ATPGYLPGPL PAGVWDAVID THMVVPGTPC RYTLEIQTTD EPVAEPLPSP APPSVKTPGR GWYRGDLHAH TIHSDGEWDI LALLEAARAR RLDFVTLTDH NTISQLRHID ALTTNDLLVM GGMELTTFWG HALSLGTRRW IDWRIRPSER SMPQIAADIE KEGGLFVIAH PLAPGDPYCT GCDWRYVEMM PGTARAVEVW NGLWHGDSNN EAALALWYEW LNWGLHLTAT AGTDAHGQAP PEVRPGFNVV YAAHRNESAI LRAIAHGRLY LSSGPVLELT GMSGETHTMI GGTLPRGAAT IHARWCDVPA NARLRLIANG AQLSEDIATP EGERTWNLEE GAAQWCVAEI RAADGEMLAV TNPIYFAPEE
|
| |