Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0824 |
Symbol | |
ID | 5538290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1080377 |
End bp | 1081684 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640892976 |
Product | hypothetical protein |
Protein accession | YP_001430959 |
Protein GI | 156740830 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000698259 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGCCGGG TTATCGAGTT GCTGCAAAGC AGGGAGTATC GCACGAAACT GGATCAGTGC ATTCACTGCG GCCTCTGCCT TCAGGCATGC CCAACCTACG ACGTTTTCGG TACAGAGATG GACTCGCCGC GCGGGCGGAT CGCGCTGATG CGCGCTGTCA GCGACGGCAG GATTGCAGAA GAGCAGGTCA ATGGCGCATT TGCCACCCAT ATCACGCGCT GTCTGGCGTG CCGCGCCTGT GAGACCGCCT GCCCGTCCGG CGTGCAGTAC GGGGCGCTGC TCGAACCGGC GCGCGAGTTG GTCGAGCAGC ATCGCTCCGT CTCGCCGACT GAACGGGTGC TACGCTGGGC AGGGCTGCAT CAGTTGATGC CCTATCGTGG ACGCCTGAAA CTGCTGGCAG CGACATTGTG GCTCTATCAG ACCACCGGAC TCCAATGGCT CGTTCGTCGT GTGAATGGGT TGCCGCCGCA TTTGCGAGCC ATGGAATCGA TCATTCCGCC GCTCACGCCG CGCTATGTCG ATTACCGCGC GCCTGCTCCC GCCGTCGGTG AGCGGCGCGG ACGGGTGGCG TTCGTGATCG GATGCATTCA GGAAGCATTC CTGGCGCCGG TCAATCAGGC GACGCGCCGG GTGCTGCGGC GCAACGGCTT TGAGATCGTT ACGCCGATGG CGCAAACATG CTGTGGTGCG GCGCACGCGC ACGTCGGGGA ACTCGATGCC GCGCGCGCGC TGGCGCGGCG CAATATCGAT GCGTTTCTGG CGGAAGATGT GATGGCGATC ATCGTCAATG CCGGCGGGTG CGGTCTGGCA TTGAAGGAAT ATCCGCACTT GCTGAAAGAT GATCCGATCT ACGCTGAACG AGCGCAGCGC TTTGCGTCAC TGGTGTGTGA TGTGAATGAG TTTCTCGCCG ATCACCTGCA TCGACCGCCG CGCGGCGAGA TGCGCATTCG CGCAACATAC GTCGATTCGT GCCACCTGCG CCACGGGCAG CGCATCTCAC GCCAACCGCG TGATCTGCTC CGCACCATTC CCGGCTTAGA ACTGATCGAA CTGCGGCAAC CCGACCGCTG TTGTGGCAGC GCGGGTGTCT ACAACATCGC CCAACCCGAG ATCGCCGATC AGGTGCTCGA CGCCAAGATG AAGGATGTTA CTGCTACCGG CGCAACGCTG GTGGTCACCA CCAATACCGG TTGCCACCTG CAACTGATCG CTGGCGTGCG CAGGTCCGGG TTGAGTGCCA GGGTGATGCA TGTCGTCGAA GTGCTTGATG AGTCGTATCA GCGTGAGCAG ATCACACAGG GGCGCTAG
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Protein sequence | MSRVIELLQS REYRTKLDQC IHCGLCLQAC PTYDVFGTEM DSPRGRIALM RAVSDGRIAE EQVNGAFATH ITRCLACRAC ETACPSGVQY GALLEPAREL VEQHRSVSPT ERVLRWAGLH QLMPYRGRLK LLAATLWLYQ TTGLQWLVRR VNGLPPHLRA MESIIPPLTP RYVDYRAPAP AVGERRGRVA FVIGCIQEAF LAPVNQATRR VLRRNGFEIV TPMAQTCCGA AHAHVGELDA ARALARRNID AFLAEDVMAI IVNAGGCGLA LKEYPHLLKD DPIYAERAQR FASLVCDVNE FLADHLHRPP RGEMRIRATY VDSCHLRHGQ RISRQPRDLL RTIPGLELIE LRQPDRCCGS AGVYNIAQPE IADQVLDAKM KDVTATGATL VVTTNTGCHL QLIAGVRRSG LSARVMHVVE VLDESYQREQ ITQGR
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