Gene Rcas_0824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0824 
Symbol 
ID5538290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1080377 
End bp1081684 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content62% 
IMG OID640892976 
Producthypothetical protein 
Protein accessionYP_001430959 
Protein GI156740830 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000698259 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCCGGG TTATCGAGTT GCTGCAAAGC AGGGAGTATC GCACGAAACT GGATCAGTGC 
ATTCACTGCG GCCTCTGCCT TCAGGCATGC CCAACCTACG ACGTTTTCGG TACAGAGATG
GACTCGCCGC GCGGGCGGAT CGCGCTGATG CGCGCTGTCA GCGACGGCAG GATTGCAGAA
GAGCAGGTCA ATGGCGCATT TGCCACCCAT ATCACGCGCT GTCTGGCGTG CCGCGCCTGT
GAGACCGCCT GCCCGTCCGG CGTGCAGTAC GGGGCGCTGC TCGAACCGGC GCGCGAGTTG
GTCGAGCAGC ATCGCTCCGT CTCGCCGACT GAACGGGTGC TACGCTGGGC AGGGCTGCAT
CAGTTGATGC CCTATCGTGG ACGCCTGAAA CTGCTGGCAG CGACATTGTG GCTCTATCAG
ACCACCGGAC TCCAATGGCT CGTTCGTCGT GTGAATGGGT TGCCGCCGCA TTTGCGAGCC
ATGGAATCGA TCATTCCGCC GCTCACGCCG CGCTATGTCG ATTACCGCGC GCCTGCTCCC
GCCGTCGGTG AGCGGCGCGG ACGGGTGGCG TTCGTGATCG GATGCATTCA GGAAGCATTC
CTGGCGCCGG TCAATCAGGC GACGCGCCGG GTGCTGCGGC GCAACGGCTT TGAGATCGTT
ACGCCGATGG CGCAAACATG CTGTGGTGCG GCGCACGCGC ACGTCGGGGA ACTCGATGCC
GCGCGCGCGC TGGCGCGGCG CAATATCGAT GCGTTTCTGG CGGAAGATGT GATGGCGATC
ATCGTCAATG CCGGCGGGTG CGGTCTGGCA TTGAAGGAAT ATCCGCACTT GCTGAAAGAT
GATCCGATCT ACGCTGAACG AGCGCAGCGC TTTGCGTCAC TGGTGTGTGA TGTGAATGAG
TTTCTCGCCG ATCACCTGCA TCGACCGCCG CGCGGCGAGA TGCGCATTCG CGCAACATAC
GTCGATTCGT GCCACCTGCG CCACGGGCAG CGCATCTCAC GCCAACCGCG TGATCTGCTC
CGCACCATTC CCGGCTTAGA ACTGATCGAA CTGCGGCAAC CCGACCGCTG TTGTGGCAGC
GCGGGTGTCT ACAACATCGC CCAACCCGAG ATCGCCGATC AGGTGCTCGA CGCCAAGATG
AAGGATGTTA CTGCTACCGG CGCAACGCTG GTGGTCACCA CCAATACCGG TTGCCACCTG
CAACTGATCG CTGGCGTGCG CAGGTCCGGG TTGAGTGCCA GGGTGATGCA TGTCGTCGAA
GTGCTTGATG AGTCGTATCA GCGTGAGCAG ATCACACAGG GGCGCTAG
 
Protein sequence
MSRVIELLQS REYRTKLDQC IHCGLCLQAC PTYDVFGTEM DSPRGRIALM RAVSDGRIAE 
EQVNGAFATH ITRCLACRAC ETACPSGVQY GALLEPAREL VEQHRSVSPT ERVLRWAGLH
QLMPYRGRLK LLAATLWLYQ TTGLQWLVRR VNGLPPHLRA MESIIPPLTP RYVDYRAPAP
AVGERRGRVA FVIGCIQEAF LAPVNQATRR VLRRNGFEIV TPMAQTCCGA AHAHVGELDA
ARALARRNID AFLAEDVMAI IVNAGGCGLA LKEYPHLLKD DPIYAERAQR FASLVCDVNE
FLADHLHRPP RGEMRIRATY VDSCHLRHGQ RISRQPRDLL RTIPGLELIE LRQPDRCCGS
AGVYNIAQPE IADQVLDAKM KDVTATGATL VVTTNTGCHL QLIAGVRRSG LSARVMHVVE
VLDESYQREQ ITQGR