| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0822 |
|---|
| Symbol | |
|---|
| ID | 5538288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1077504 |
|---|
| End bp | 1078754 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640892974 |
|---|
| Product | kynureninase |
|---|
| Protein accession | YP_001430957 |
|---|
| Protein GI | 156740828 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3844] Kynureninase |
|---|
| TIGRFAM ID | [TIGR01814] kynureninase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.632925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00000920194 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCACG ATGCTCTGGT TTCTCGCACG ACGCTCATCA CGCGCGACGC CGCCGATCCG
CTGGCGCGCT TTCGCGATCT CTTCCACATG CCTGATGATC TCATCTACCT GGACGGTAAC
TCCCTCGGTC CCCTGCCCAA ACGCACCGTT GAGCGCATGC AGCAGGTCGT GCAGGACGAA
TGGGGGCGCC TGCTGATCCG GGGATGGACG GCGTGCGACT GGATCAATGC TCCGTCGCGC
ATTGGCGGCA AGATCGCGCG CCTGATCGGT GCGCACCCCG ACGAGGTGAT CTGCGCCGAC
TCGACCTCGG TGAACCTGTT CAAGACCCTT GCGGCAGCGC TGGCGCTGAA GCCGGGTCGG
CATGTGATCC TCTCGACGCC GGATAACTTT CCGACCGACC TGTACATGGC GCAGGGGTTG
ATCCGGCATC TCGGCGGCGT TCACGAACTG CGGCTGGTAG ACGGTGAGCG GATCGAGGAT
CATCTGAACG ATCAGGTCGC TGTGCTCCTG CTGACCCACG TGAACTATAA AACCGGGCGC
ATGTACGATC TGGCGCATCT GACGCAGCGG GCGCACGCCT GTGGAGCGCT GACGCTGTGG
GACCTGGCGC ACTCGACTGG TGCAGTTCCG ATGGACCTGA ATGGCGCAGA GGTTGATTTT
GCGGTCGGGT GCGGCTACAA ATATCTCAAC GGCGGTCCCG GCGCGCCTGC CTATCTGTTC
GTTGCGCGCC GATGGCAGCC GGTGTTCAGT CAACCGCTCT CCGGGTGGAT GGGGCATGCC
ACGCCCTTTG CCTTCGATCC GGTGTACGAA CCTGCGCCGG GGATCGGGCG CTACCTGTGC
GGTACGCCGC CGATCCTCAG CATGGCAGCG CTCGAATGCG GCATCGATCT GCTGCTCGAC
GCCGATATGC AGCAGATTCG GGCAAAATCA CTGGCGCTGA CCGACCTGTT CATTCAGTTG
GTCGAGATGC GCTGCGCCGG GTATGGGCTG GAACTGATGA CGCCGCGCGA CCACGCTATC
CGTGGCAGTC AGGTCAGTTT TCGCCATCCT CAGGGGTACG CGCTGATGCA GGCGCTGATC
GCCGCAGGGG TTATCGGCGA CTTTCGCGCG CCGGATATTG TGCGCTTCGG GTTTGCGCCG
CTCTACCTGC GCTTCGTCGA TGTGTGGGAT GCCGTTGATC GTATGCTCCA CATCCTCGAA
GCGCGCGCGT GGGATCGGGA GGAGTTTCGG CAGGTGAAGC AGGTGACATG A
|
|---|
| Protein sequence | MPHDALVSRT TLITRDAADP LARFRDLFHM PDDLIYLDGN SLGPLPKRTV ERMQQVVQDE
WGRLLIRGWT ACDWINAPSR IGGKIARLIG AHPDEVICAD STSVNLFKTL AAALALKPGR
HVILSTPDNF PTDLYMAQGL IRHLGGVHEL RLVDGERIED HLNDQVAVLL LTHVNYKTGR
MYDLAHLTQR AHACGALTLW DLAHSTGAVP MDLNGAEVDF AVGCGYKYLN GGPGAPAYLF
VARRWQPVFS QPLSGWMGHA TPFAFDPVYE PAPGIGRYLC GTPPILSMAA LECGIDLLLD
ADMQQIRAKS LALTDLFIQL VEMRCAGYGL ELMTPRDHAI RGSQVSFRHP QGYALMQALI
AAGVIGDFRA PDIVRFGFAP LYLRFVDVWD AVDRMLHILE ARAWDREEFR QVKQVT
|
|---|
| |