Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0820 |
Symbol | |
ID | 5538286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1073819 |
End bp | 1076167 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640892972 |
Product | iron permease FTR1 |
Protein accession | YP_001430955 |
Protein GI | 156740826 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
TIGRFAM ID | [TIGR00145] FTR1 family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.594209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000623566 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCTCAT GGCAGCGCTT CGCAGTGGCA GGCGTTCTGA TCGTCGCACT CCTGGCGCCA CACGTGGCGC TGGCGCAGTC GCCCGATCCC GGTCGGACGG CTGAACGGAT CCGTGCAGCG CTCTTCCAGG CGCAGATGCA GATGCACACC GATCCGACCG GCGCGCGCGC GCGCATGGAG GAGGCGCACG ACGCCTATCG CTTACTCGCA CCGACTATTG CCGCCTATGC GCCAGCCGCC GATGCGCGCG CGCGCACCGG GTTCTCCGAC GCGAAGCAGG CTCTCACTAT CGGCGATATG CCTGTCTTCG CCGATGCACG AGCGCGTATC TGGACAGCAG TGCTCGCCGC AGGGTACGAT ATCGTCGTTG GGTCGCTTCG AGCGGGTGAT GCCGATACGG CACGCCAATG GCTGACGGTG CGCGAGTTCC GCCATGCCAC ACGTTTCTCG CGTCCGAATG CCGATGCCGC TCGCGCCGTT TACGATGCTG CCACGCAAAC CATCCCCATT GCCGATGCGA TCCCGGCCGT TCAGTCAGAC CTGCTTGATA CCTATCAGGC GCGTCTGAAC GAAGCGTTAC AGACCTTGAT CGCCGCCGAT CAGCAGGACT TCGCCATCCG GCGCGCCGAG GCTGCGGCGC TGGCTGAGGG CTATTTTACG CTGCTTGCGC CGGCGTATGC CGAACAGCGC GGCGATGCTG CCGCCAATAC CGCGTATGCG GCATTTGAAC GCCTGCGGCA GGCGGCGCTG GCAGGAGTTA ATCTCACCAT TCCTCTGGAA GCCGTGCAAC AAACCCTGCG TGGATTTCGT GCAGCGCCGC TTAGCCCGGC GGAACAGAAG CGCCGCACCG GTCAGATGCT GCGCTTCCTG CACCTTGTGC CGGTCGAGTA TGAGCGGGGT GTGCGCAATG GACAGGTCAC GACCGAGCTC GAGATTCGTG AAGCGATCAC ATTCCACGCC GGCGCATTCG CCGCCTTTAC CGATCTGCGC GATCTGTTGG AACAACGTCA TCCTGCATTG ACGGAACGGG TCGCCGGGCA GTTCGATACG CTCGGCGCAA TGCTCGCCGG CGCCGGCAAT CGCAGCGCTG TCGCCGACCC GACAGCAGTG AAGCGTGCAA CGACCGATCT GCTCTCCAAT CTCACAACGC TGCTCCCACG TGAATGGCAA AAGCAGGATA GCAGCGCCGA TTTCGATGTC ATCCGCACGG CGCTCGACCA GATGGAGCAG GCGGTTCGGG CTGGCGAGTA CGAATTGGCA GAGTCGGCGC GCCTGGAAGC CTATGCCATC ATGGAGATCG GTCCAGAAGC AAAACTTATC GCATTTGCGC CACAGTATAA ACCGCTTATC GAAGGGTATT TCTGGTATGG TCAGGGGAAC CGCAAAGGTC TGGCGCACCT GATCGAACGG CGCGCCCCGC CTGCCGAGAT CGCCGCCACG CGCATCGCGC TCGATCAGGC GCTGGCGGAA GCCGAACAAA CGCTGGCGGG AAAAAATGCT CCGGGCGCGA TTGCAGCCAA TGCAGCGGTC ATCGTCTTCC GCGAAGGGTT GGAGGCGGTC CTCATTCTGG CATCGTTGAT GGGCAGTCTC AAAATCGGCG CGCAGCGTCG TTTCCGCAAA CCACTCTGGA TTGGCACAGC GCTGGCGTTT GTTGCGACGG TGGTAACCTG GGTGCTGGCC CAGGAGGCGC TGATGGCGAT GGCGCGCTTT GGCGAAACGC TTGAGGCGAT TGTGTCGCTG ATCGCCATTG CAGTCCTGCT GCTGATCACG AACTGGTTCT TCCACGATGT GTACTGGAAA GACTGGATGG CAAACTTCCA TCAGCAGAAG AAACGCATTC TCAGCGGGCA GGCAGGGCAA TGGCTCGGCT TGATGACGCT TGGCTTCGCC AGTATCTATC GTGAGGGGTT TGAGACCGTG CTGTTTCTTC AGGCGCTGAC CCTGGAAGGC AGTGTCACTG TCGTGTCTGC CGGTGTGGCG ATCGGTCTGA TTGCGACGCT GCTCGTTGGT CTGGCAGTGT TTGTGATGCA GGCGAAGTTG CCGCACAAGA AAATGTTGAT CGTCACGGGG GTGCTGATCG GCGCCGTGCT GCTCCAGATG GTGGGCAAGA CGGTCAATGT GACGCAGGTG ATCGGATGGC TGCCGATCCA TCCGATTCGC TGGCTGGAGC TGCCGTACTG GGCAGGGTTC TGGTTTGGTC TGTATCCGAC ATGGGAAGGC ATCGGACTCC AGGCGGCTGC GGCAATCTTC GTCATCGGCA GTTACTACCT GGCGGAATAT ATGCAGCGGC GTGAGCGCCG GATGAAGCAC TCTGCGAGCA CCGCCGCCCA TCCTGTTCGT GAAGTATGA
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Protein sequence | MRSWQRFAVA GVLIVALLAP HVALAQSPDP GRTAERIRAA LFQAQMQMHT DPTGARARME EAHDAYRLLA PTIAAYAPAA DARARTGFSD AKQALTIGDM PVFADARARI WTAVLAAGYD IVVGSLRAGD ADTARQWLTV REFRHATRFS RPNADAARAV YDAATQTIPI ADAIPAVQSD LLDTYQARLN EALQTLIAAD QQDFAIRRAE AAALAEGYFT LLAPAYAEQR GDAAANTAYA AFERLRQAAL AGVNLTIPLE AVQQTLRGFR AAPLSPAEQK RRTGQMLRFL HLVPVEYERG VRNGQVTTEL EIREAITFHA GAFAAFTDLR DLLEQRHPAL TERVAGQFDT LGAMLAGAGN RSAVADPTAV KRATTDLLSN LTTLLPREWQ KQDSSADFDV IRTALDQMEQ AVRAGEYELA ESARLEAYAI MEIGPEAKLI AFAPQYKPLI EGYFWYGQGN RKGLAHLIER RAPPAEIAAT RIALDQALAE AEQTLAGKNA PGAIAANAAV IVFREGLEAV LILASLMGSL KIGAQRRFRK PLWIGTALAF VATVVTWVLA QEALMAMARF GETLEAIVSL IAIAVLLLIT NWFFHDVYWK DWMANFHQQK KRILSGQAGQ WLGLMTLGFA SIYREGFETV LFLQALTLEG SVTVVSAGVA IGLIATLLVG LAVFVMQAKL PHKKMLIVTG VLIGAVLLQM VGKTVNVTQV IGWLPIHPIR WLELPYWAGF WFGLYPTWEG IGLQAAAAIF VIGSYYLAEY MQRRERRMKH SASTAAHPVR EV
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