Gene Rcas_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0817 
Symbol 
ID5538283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1072290 
End bp1073138 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content60% 
IMG OID640892969 
Productmethyltransferase type 11 
Protein accessionYP_001430952 
Protein GI156740823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000364558 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGGATG TTCATAGGAA AGGAATTGGT ATTATGCCGG AAGAAACCGC GACACATCTG 
CCTGGCGCCC ATCTGGATAT CGCAAAGATG CCCGGGCACT GGCTGCTGGC GCGCATGGGT
AAGCGCGTGC TGCGCCCCGG TGGTCTCGAG TTGACCCGGA GCATGCTCGA TGCGCTGTCC
ATCGACTCGA GCGATCATGT GATCGAGTTT GCGCCGGGTT TGGGAGTGAC CGCGCGCCTG
GCGCTGGCGC GGCAACCAGC ATCGTACACC GGCATCGAGC GCGATGAAGC CGCTGCCCAA
AGTGTTCGTG CATGTCTGTC CGACCCGCGC TATCGATGTC TTGTCGGCAG CGCCGAGAAA
AGCGGACTGG AAGACGCTTC GGCGACGGTC GTCTGCGGCG AGGCGATGCT TACCATGCAC
ACGCCAGGTC AGAAAATGCG GATCGTTCGT GAGGCGTATC GCATACTGAA ACCTGGTGGA
CGGTACGGCA TCCACGAGTT GGGATTGACC CCTGACGATC TGGGAGAAGC GGAAAAAGAC
GCCATTCTCC GCGATCTCTC TGCGGCAATT CGCGTTGGCG CCCGTCCGCT GACCTCTTCG
GAATGGCGCG CTGTCCTGGA AACTGAAGGG TTTCAGGTGC GCGCAGCGTT CACTGCACCG
ATGCATCTGC TGGAACCCAG GCGCCTGATC CAGGACGAAG GGCTGGGAAG GGCGTTGCGG
ATCTTCTTCA ATATTCTCCG CACACCGGCG GCTCGTCAGC GTGTTCTGGC AATGCGGCGC
GTCTTTCGCG CACATCAGGA TCATCTGATG GCAATCTCGC TCATAGCGGT CAAACCGGAG
GCTTTATGA
 
Protein sequence
MPDVHRKGIG IMPEETATHL PGAHLDIAKM PGHWLLARMG KRVLRPGGLE LTRSMLDALS 
IDSSDHVIEF APGLGVTARL ALARQPASYT GIERDEAAAQ SVRACLSDPR YRCLVGSAEK
SGLEDASATV VCGEAMLTMH TPGQKMRIVR EAYRILKPGG RYGIHELGLT PDDLGEAEKD
AILRDLSAAI RVGARPLTSS EWRAVLETEG FQVRAAFTAP MHLLEPRRLI QDEGLGRALR
IFFNILRTPA ARQRVLAMRR VFRAHQDHLM AISLIAVKPE AL