Gene Rcas_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0810 
Symbol 
ID5538276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1064666 
End bp1065415 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID640892962 
Producthypothetical protein 
Protein accessionYP_001430945 
Protein GI156740816 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0233285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC AACCGCACCG GCGCGCTGTA CTCTTTGTGA CGTGCATTGT CGATCAAGTC 
CATCCCAATA TCGGGTTGGC CGCCGCAGAA TTGCTCGAAC GGCAGGGGGT CGAGGTCGTT
GTTCCACGCG GGCTGACGTG CTGTGGGCAG ATGGCGTTCA ATGCCGGGTT CCGTGATGAT
GCCTATGCGG TCGCAGGGCG GACTATCGAA ATCCTGCGCA ACCAGGGAGA TGTCGTGCTT
CCGTCCGGTT CGTGTGGTGC GATGATCCGC CATCTGTACC ACGAACTGTT CCACGGCACA
CGCCACGAGG CCGCCGCGAA AGAACTGGCG CAACGCACGT ATGAACTGAG TGAATACCTG
GTCGATGTGC TCGGTGTCAC CGATGTTGGT GCGCGCTACG ATGGGGTCAT AGCAGTTCAC
GACGCCTGTC ATGGTCTGCG CTACATGGGT TTGGGGCGGC AGGCGCGCAT CCTGCTCGAC
CATGTCGCTG GCGCGCGCAT TGTGTCATTG CCGGGCAGCG ATGAGTGCTG CGGTTTTGGT
GGTCTGTTTG CCGTTAAGCA GCATCAGATT TCTGAAGCGA TGTTACAGCG CAAACTGGCG
CATATCGCCG AATGCGGCTG CGACCTGGTA GTGACCGGCG ATTCGAGTTG CATGACGCAG
ATCGCCGGTG GTCTCAGTCG GTCGAAGTCG CGGGTGCGGG CATGCCATCT CGCCGAGGTG
CTGGCGAACA GGGTTGGGTT GGGGGGGTAG
 
Protein sequence
MTVQPHRRAV LFVTCIVDQV HPNIGLAAAE LLERQGVEVV VPRGLTCCGQ MAFNAGFRDD 
AYAVAGRTIE ILRNQGDVVL PSGSCGAMIR HLYHELFHGT RHEAAAKELA QRTYELSEYL
VDVLGVTDVG ARYDGVIAVH DACHGLRYMG LGRQARILLD HVAGARIVSL PGSDECCGFG
GLFAVKQHQI SEAMLQRKLA HIAECGCDLV VTGDSSCMTQ IAGGLSRSKS RVRACHLAEV
LANRVGLGG