| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0802 |
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| Symbol | |
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| ID | 5538268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1047975 |
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| End bp | 1048622 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640892954 |
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| Product | 4-vinyl reductase 4VR |
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| Protein accession | YP_001430937 |
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| Protein GI | 156740808 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1719] Predicted hydrocarbon binding protein (contains V4R domain) |
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| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.887887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTGACG AGCGTGGCAG CGCAGATGAA CTTGAGGTGC GATATTATCC CAATCTGATC
GGCCGCCTGT ATCTCATCAG CCTCGAGGAT GTCATGGGGC GAAATGGCGT CAATGCGCTG
TTGAACCTGG CCGGAACCCG GCATCTGGTC AATAATTACC CGCCAAATAA CCTCAAACGC
GAATTTCCAT TCTCGGATTT GTCGGCGATC TCCAAAGCCA CCGAGACGAT GTACGGTCCA
CGCGGCGCGC GCGGCATGGA ACTTCGCGCT GGACGCTATG CGTTCAACCT GGGGCTGAAA
GAATTTGGTC CGCTCCTCGG TATGGCTGAC CTTGCGCTGA AGCTCATGCC GATGACGATG
AAAATGAAGA TCGTTCTCAA TGCGACGGCG CAGACATTTG ATCGGTTCAG TGATCAACCG
TCCCATGTCG AGGAGCGTAA GGGTCAGTTC CTGTACATTA TCGATAAATG CCCGATCTGT
TGGGGACGGA AATCGGATCG TCCGGTTGGC CATCTTGCGC AGGGTATTCT CGAAGAAGCG
CTCACATGGG TCACCGGCGG TCATTCGTTC CGTATCGAAC AGACTGAGTG CCAGGGCATG
GGATGCGAAC GATGTATCTT TGCCATCGAT AAAGACCCGA TCGATTAG
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| Protein sequence | MPDERGSADE LEVRYYPNLI GRLYLISLED VMGRNGVNAL LNLAGTRHLV NNYPPNNLKR
EFPFSDLSAI SKATETMYGP RGARGMELRA GRYAFNLGLK EFGPLLGMAD LALKLMPMTM
KMKIVLNATA QTFDRFSDQP SHVEERKGQF LYIIDKCPIC WGRKSDRPVG HLAQGILEEA
LTWVTGGHSF RIEQTECQGM GCERCIFAID KDPID
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