Gene Rcas_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0795 
Symbol 
ID5538261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1039642 
End bp1040505 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content70% 
IMG OID640892947 
Producthypothetical protein 
Protein accessionYP_001430930 
Protein GI156740801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CTGTGACTAT GCCGGAGGTG GACCCCGCCC AACCGCCGCC GCCGGAGTAT 
CTGCCGGATT ATGACCGGTT CATCACCGAG GACGACGCGC CGGTGGACAA CTTCTTCTCC
GAAAAGCAAC AGCGCCTGCT GACCGAGCCG CTCTACAGCG CCGACGTCGC CGCGCGCCTC
GGACGCCCCC TCCTCGCCGC CGCCAATGTC GGCATCTTCT TCGGCGAAGG CGAGCCGGCC
ATCGTCCCCG ACGCCCTGCT CAGCCTGGAC GTGCGCCTCG CCGACGACCT CTGGCCCAAG
CCCAACCGCT CGTATTTCAT CTGGCGCTTC GCCAAGCCGC CCGACGTGGT GGTGGAGATC
GTCTCCAACC GCGAAGGCGG CGAACTCGAC CGCAAACGGA CGCGGTACGC CCAACTCGGC
GTCGGCTACT GCCTCGTCTT CGACCCGCAG CGCCTCCTGG GAACGGAACT CCTGCGCTGC
TACGAGTTGC GCGGGCGGAC CTACACGCCG TGCGACAGCC CCATCCTGCG CGACGTCGGG
CTGGGGGCGC GCCTGTGGGA CGGGGAGTAC GAAGGGGTGC AGGCGGTCTG GCTGCGCTGG
TGCGACCGGG ACGGCCACCT GATCCCCACC GGGGCGGAAC TGGCGGCGCA AGAGCGCCAG
CGCGCCGAAG CCGAGCGCCA GCGCGCCGAA GCCGAACAAC AGCGTGCCGA AGTGGAGCGC
CAGCGCGCCG AAGCCGAACA ACAGCGTGCC GAAGCCGAGC GCCAGCGCGC CGAAGCCGAG
CGCCAGCGCG CCGAGCGGCT GGCGGCGCGG TTGCGCGCCC TGGGGATCGA CCCCGATGCG
GATATGCCCG AAATACATCA ATAA
 
Protein sequence
MTTPVTMPEV DPAQPPPPEY LPDYDRFITE DDAPVDNFFS EKQQRLLTEP LYSADVAARL 
GRPLLAAANV GIFFGEGEPA IVPDALLSLD VRLADDLWPK PNRSYFIWRF AKPPDVVVEI
VSNREGGELD RKRTRYAQLG VGYCLVFDPQ RLLGTELLRC YELRGRTYTP CDSPILRDVG
LGARLWDGEY EGVQAVWLRW CDRDGHLIPT GAELAAQERQ RAEAERQRAE AEQQRAEVER
QRAEAEQQRA EAERQRAEAE RQRAERLAAR LRALGIDPDA DMPEIHQ