Gene Rcas_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0779 
Symbol 
ID5538245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1019225 
End bp1019974 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID640892932 
Producthypothetical protein 
Protein accessionYP_001430915 
Protein GI156740786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.927601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.868824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTGCA ACTATGACCA CCAGCGGCGC GTGCGTTATC AGGCGGACGT CTTCCTTGCC 
CGCGTTGCCG ACCATCCTGA CGCGGTCGTG CTCACCGACG TGCGCATCGC CTGGGACATG
CCCAGCTTGA AGGCGCACGG ATCGGATATG ATGGTCATCT TCGGCTTGCA GATCATCCGC
AACTGGAGCA CGTTCGATGT AGCGGTGGAA GGAGTGCGTC CGACGCTGAT CGTCGAGGTA
ACCTCGCTGG AGACGTGCGT GCTCGACCTG GAGGTGAAGA TGGCGCACTA TGCTTTGGCG
GGTGTGCCGC TCTACGTGAT TGCGGGCGCC CATGAGCAGC GCAGCGAAGC GCTGGTGCGC
GCACTCGGCT ACGAGCTGGC GGGTGCAACA TATCGCCGAC AGGTTCCGAA TGAGCAGGTA
TGGTTGTGGC TGGAGCCGTT GCGGGTTTGG ATCGGGGCAG AGGGACGTGA GGTGTATTGT
TTCGACGAGC AGCGGCGGAT CGGCGATTAC GCTACGTTGA CGACAATCGT GATCGAGTCG
GAGGAGCAGG TGGCAGCGGC CTGGGCAGCA GCAAAAGCCG AGGCGCGAGC GCGCATGGAA
GCCGAGGTGC GCGCCCGTGA AGAATCTGCC GTGCGGCGCG AAGCGGAACA GGCACGGCGT
GAAGCCGAGG CCCGTGCCGC GCCGAAGCGC GCCTGCACGC GCTCGAGTCG GAACTGCGCC
GGTTGCGCGG CGAGGGGTAC AGGACCTTGA
 
Protein sequence
MLCNYDHQRR VRYQADVFLA RVADHPDAVV LTDVRIAWDM PSLKAHGSDM MVIFGLQIIR 
NWSTFDVAVE GVRPTLIVEV TSLETCVLDL EVKMAHYALA GVPLYVIAGA HEQRSEALVR
ALGYELAGAT YRRQVPNEQV WLWLEPLRVW IGAEGREVYC FDEQRRIGDY ATLTTIVIES
EEQVAAAWAA AKAEARARME AEVRAREESA VRREAEQARR EAEARAAPKR ACTRSSRNCA
GCAARGTGP