| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0777 |
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| Symbol | |
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| ID | 5538243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1016687 |
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| End bp | 1017889 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640892930 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001430913 |
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| Protein GI | 156740784 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.733843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCAG CCTCGGAGAA GTTGGCTATC GATGGTGGCG TGCCTGTGCG CCAAAATCCA
TTGCCCTATG GGAAGCAATG GCTGGAAGAT GATGACATTA CAGCCGTCAT TGAAGTCCTA
CGCTCTGATT GGCTGACGAC TGGCCCAAAG GTGAGTGAGT TTGAGCAAGA GTTTGCCGGT
TTCGTGGACT CTAAGGAAGC AGTGGCCGTA AGTAGTGGCA CTGCTGCACT ACACGCAGCA
ATGCATGCCA TTGGCATCGG GCCAGGTGAT GAAGTTATCG TGCCTGCTAT GACCTTTGCT
GCGACTGCCA ACTGTGTTGT TTTCCAGGGT GGAACACCAG TCTTTGTCGA TGTCGACCCT
GCTACGCTGC TCATTGATCC AGTACAAGTT GAGACAAAAA TTACACCGCG AACTAGAGCG
GTAATTGCTG TGGATTACGC TGGACAGCCA TGTGACTACG ATGCGCTTCG TGATATAGCT
GATCGATACA AATTGATCTT AGTAGCGGAT GCCTGCCATG CCTTAGGTGG ACAATATAAA
GGTCGACCAG TAGGTTCGTT AGCCGACATA AGCACCTTTA GCTTTCATCC AGTCAAGCAC
ATTACCGCTG GTGAAGGTGG AATGATTACC ACGAATAATC CAGAGCTAGC AAGGCGTATG
AGGACTTTCC GTAATCACGG TATTCCCATT GACCATCGCC AGCGCGAGCA ACAAGGTTCG
TGGTTCTACG AGATGGTAGA GTTGGGTTAT AATTATCGAC TATCGGACAT TCAGTGTGCT
CTTGGTCTAA GCCAGTTGCG GAAGCTTCCC CGTTGGTTGA ATCGTAGACA AGAGATTGCT
CGGCATTACG ATGCGGCTTT TTACGGAGTA CCTGTAGTGA GACCGCTGCA CGTGCGGGCG
GATGTCTCCC ACGCGTACCA TCTGTACGTG ATCCGGCTCG ATTGTCAGCA ACTCCGAACA
ACAAGAACGG AAGTTTTCAA GGCATTGCGT GCTGAAGGAA TAATGGTTAA TGTTCATTAC
ATTCCGGTGC ATTTACACCC TTATTATCGG CAACGACTCG GATGCAGAGA AGGGGAATAT
CCAGTAGCAG AGTCGATTTA CAATCAATTA ATTAGCTTAC CGATTTTCCC GGCTATGACA
GATGAAGATG TAAAGGATGT CATCAAAGCC ATGGATAAGG TAATAGCTGC ATATCGAAAA
TAG
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| Protein sequence | MIAASEKLAI DGGVPVRQNP LPYGKQWLED DDITAVIEVL RSDWLTTGPK VSEFEQEFAG
FVDSKEAVAV SSGTAALHAA MHAIGIGPGD EVIVPAMTFA ATANCVVFQG GTPVFVDVDP
ATLLIDPVQV ETKITPRTRA VIAVDYAGQP CDYDALRDIA DRYKLILVAD ACHALGGQYK
GRPVGSLADI STFSFHPVKH ITAGEGGMIT TNNPELARRM RTFRNHGIPI DHRQREQQGS
WFYEMVELGY NYRLSDIQCA LGLSQLRKLP RWLNRRQEIA RHYDAAFYGV PVVRPLHVRA
DVSHAYHLYV IRLDCQQLRT TRTEVFKALR AEGIMVNVHY IPVHLHPYYR QRLGCREGEY
PVAESIYNQL ISLPIFPAMT DEDVKDVIKA MDKVIAAYRK
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