| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0761 |
|---|
| Symbol | |
|---|
| ID | 5538227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 995596 |
|---|
| End bp | 996834 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640892917 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001430900 |
|---|
| Protein GI | 156740771 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0543592 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCA CGACGAACGC CAGTATCGAT CAATCCGCTG CTCGAACGTC TGCAACCGCA
TGGCGCTGGG CGCTGCGGCT GTACGCCGGT TATAGCGCCC TCTTCATCCT CTGGAATGCC
TGGGTCTCGT CTGTTTATCC GAAATGGGTG GAAGAAGCGT CTGTCGCTGT CTGGTTCCCA
TCGGCGCCGG TGGGGACGTG GTTGGAGCGG GTGGTACTCC TTCCGCTTTT GCGCTATGAT
GTCCTCTGGT ATGTTGGCAT CGCACAGCAC GGCTATGGTC ATCGTCCTGG CGACACGGCG
TTTCATCCGC TCTATCCGTT GCTCATCGGC GTGTTGGGGC GGTTCCTGGG TGGAGCGTAT
CTGCTCGCGG CGTGGTTGAT CGCGCAGGTC TGCTGCGTGG CGCTGCTGGC GATGCTCTAT
CGCCTGGTGA CGCTCGATGA TGACGATGCC ACAGCGCAAC GCACAACGCT GTTCCTGATC
GGTAGTCCGC TCGGTTTTTC GTTTCTGCTG CCCTACACCG AGTCGCTGCT GTTGTTGAGC
ATCGTGGCGG CGTGGTACGC CGGTCGGAAG GGACGCTGGT GGCTCGCGGG AGCGGCCGGC
GGCGCAGCGG CGCTCACCAA GCAACCGGGG GTGGTGGTGG TGGCGCCGCT TCTCTGGGAA
CTCTGGCAAC AATATCGCGT GACCGTCCGC ACCATGGGCG CACGCGCGCT GATCAGACCG
CTGGCCGGTC TGTCGCTCAC GCCGCTGGCG CTGCTGGGAT GGATCGTCTA CCGCGCAACA
CTCGGCGATG TTGCATTTTC CTGGCGCGAA CCGGGCACGC TCGTCAGCGC ATTGCTGGTC
ACGCCATCAT ATGCCGATGT CTGGGGCGAA ACCTTCAGTT GGCCCTGGGT CAATTTCGGC
TATGCGCTCA ACCAGTTGCG TGAACACCCC TACTTCTATC TGCTGCTCAA TCTGATGGTC
ATGCTGATTA TGCTGGCGCT GACGCTGGCA TCCGCCGCGC GGGTGCGGCG CAGTTATGCG
ATCTACAGCC TGGCGCTGGC AGCAATGAAC CTGGCGATTG TCTACCCGCT CTGGCCCTAC
ATGGGGATCA TTCGGCGGTT TACCATCATC TTCCCGATGT TCATTCAACT GGCGCGCTGG
GGGCGATCTC CGGCGGTGCT GTGGCTGACG CTGACATGCA ATGCGATCCT GTGGACGCTG
ATCGCGTCGA TGTATGTGCG GAATGCGTTT GTACCGTGA
|
|---|
| Protein sequence | MAITTNASID QSAARTSATA WRWALRLYAG YSALFILWNA WVSSVYPKWV EEASVAVWFP
SAPVGTWLER VVLLPLLRYD VLWYVGIAQH GYGHRPGDTA FHPLYPLLIG VLGRFLGGAY
LLAAWLIAQV CCVALLAMLY RLVTLDDDDA TAQRTTLFLI GSPLGFSFLL PYTESLLLLS
IVAAWYAGRK GRWWLAGAAG GAAALTKQPG VVVVAPLLWE LWQQYRVTVR TMGARALIRP
LAGLSLTPLA LLGWIVYRAT LGDVAFSWRE PGTLVSALLV TPSYADVWGE TFSWPWVNFG
YALNQLREHP YFYLLLNLMV MLIMLALTLA SAARVRRSYA IYSLALAAMN LAIVYPLWPY
MGIIRRFTII FPMFIQLARW GRSPAVLWLT LTCNAILWTL IASMYVRNAF VP
|
|---|
| |