Gene Rcas_0756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0756 
Symbol 
ID5538222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp990367 
End bp991071 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content56% 
IMG OID640892912 
Productmethyltransferase type 11 
Protein accessionYP_001430895 
Protein GI156740766 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.055358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCT ACGATTATTA TGGCGAGCGG GCTGCGACCG CAGCAGGCAT AGGATGGGTG 
CGCGCACAGG CGCGCTACGT GCTTGACCGT TTGATGCAGG CGTCGCCCTC GGCTGCATCT
CTGCTCGAAA TCGGACCCGG AAGAGGCGTG TTTGCTGACG CCTGTCGCCA ACATCACGTT
CGCTATTGCG CACTCGATAT TAATATCCGT CTGTTGAGAG GTCTGGCGGA TCGCAGCCAC
AACGGCATGC AGGCTCGAGC AACGCAGATT CCGTGCGCTG ATGAGATGTT CGACATCACC
TTTGCATCCC ATGTCATTGA GCATAGCCCT GCATACAACG ATGCGCTTGC GTTTCTGGAG
GAAATGCGCC GGGTAGCGAA ACGCGGCGGA CTGGTCGCCA TCGTTGCGCC AGACTATCTT
GCGCTGCGAG AGGATTTCTG GAATTGCGAC TACAGCCATA GTTTCGTCAC GACCCGTCGT
CGATTGCGTC AAATGTATCA CGATACAGGT TTGACTATTC TTGACGAATG CAACCTCTAT
GGTCCGCTCA CCGGCATAGT GGGATGGTGT GCCGGGCAAA CATTCGGTGG ACACGTCATG
GGCATGATCG CCCGGACAGT GCCGGGAATA GTTGGAGAGA AACTCTACAA ACTACGGCTG
ACTTTCGCGG GGGCAATCCT GATGATCGGT CGAGTAGCAG GATGA
 
Protein sequence
MPFYDYYGER AATAAGIGWV RAQARYVLDR LMQASPSAAS LLEIGPGRGV FADACRQHHV 
RYCALDINIR LLRGLADRSH NGMQARATQI PCADEMFDIT FASHVIEHSP AYNDALAFLE
EMRRVAKRGG LVAIVAPDYL ALREDFWNCD YSHSFVTTRR RLRQMYHDTG LTILDECNLY
GPLTGIVGWC AGQTFGGHVM GMIARTVPGI VGEKLYKLRL TFAGAILMIG RVAG