| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0752 |
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| Symbol | |
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| ID | 5538218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 984305 |
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| End bp | 986209 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892908 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001430891 |
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| Protein GI | 156740762 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0100728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0772992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA CGACGAACGA CTGGCTCCAG CAGGGCATTG CAGCCGCGCG CGCCGGGCAG
CGCGCGCAGG CGCGTCAATT CTTCGTGCGG GCTATTCAGG AGAATCAGTA TAACGACGAT
GCGTGGGTCT GGCTCGCCGG TGTTGTCGAT AATCCCGCAG ATATGCGGCG CTGTCTGCAA
CAGGCGCTGC GGATCAATCC GCTCAACCCG CAGGCGCGTC AGGGGATCGC CTGGCTTGAT
CGGCAGACAC GGCAGGCGCA GAAGGCATCA TCATCTGCTA CCAATATGAA TGATGGTCAG
AAGCCATCGT CGTCTGCTAC CGCGCACTCA TCCGTCCAGG CTGAAAATCA GGTGGACAAG
ACATCGTCTC AGAATCAGAG TCATTCCCCA GCGACGGACG GCTCTCTGTC AGTATCTCAA
TCGAGTGCAT CAGCGAAACC GGCGTCTGCT CACGACTCCC ATGCGCCTGG CACTCCTGAG
CCTGCTCCGA AACCCGCTCG TCGTTTCTCG TGGTTCGGCA AGTCCAAACC GGCTCACAGC
GCCGTTGCCG ACGACTCTGC CACCGTGGCG GCAGCGCCAC AGCCTGCCCG CCGCTTTTCG
TGGTTCGACA GGTCTGCTGC GCCTACCACT CCCGACGAAG CCGCAGGCGG CGCGCATGGT
GCGAAGCCCG CTCGTCGTTT CTCGTGGTTC GGCAAGTCCA AACCGGCTCA CAGCGCCGTT
GCCGACGACT CTGCCACCGT GGCGGCAGCG CCACAGCCTG CCCGCCGCTT TTCGTGGTTC
GACAGGTCTG CTGCGCCTGC TGCGCCCGCC ACCCCAGACG AGGCGCCTGG CGCGGCTTCC
ACGGCACAGC CTGCCCGCCG CTTCTCGTGG TTCGGCAAAT CCAACGCCGT AGCAAAGCCA
ATGGTTGCCG CAGCCGCGAC GGCTACCGTG GCAGGAGCGG CGGGCGCCAC ACCGCCTGCG
TCCGCAGCGC CCCCGGCTGC TCCTGGCGCA AAGCCGCGCC GCAAAGAAAA GGTGCTGCCG
CCGGAAGAAG GCGACCCGGC GCGCGACTGC TGCCCATACT GCGGCGAGTT GAACAAACCG
GATCGCCAGT GGTGCCGTCG CTGCGACCGC AGTCTGATGA TCCGTGGACC GGTGCGCGAT
CAACGTTCTC CCTGGCTCTC GATTCTCGGC ATCCTCTGGG TGCTTGGCGG TGTGCTGGGC
ATTCTGGGCG CTATTGCAGG GTTGATCGTC GCGCTGGCGC TCTACAACTC GGCAAGAGGC
AGTCTTTCGG ATTTTCCGCT CGTCATTGTG GTGGTCTTCG TGATTATCGC TTTGCTCTAT
GGTGGGCAAA TTGCGATTGC GCGCGCGATG ATGAACCGCG CCCGCTGGGC GTACTGGATC
ATCGCCGTTG TGACTGTGCT GCAACTCGGC GGCTCGCTGT TCGGGGCACT CGGCGCCATT
GCGACGATCG GCAATTTCAT CACTCAGGCG CAGGCGTTCC TTCCCTCGCA GGAAGCCGTA
TCCGCAGTCG CCGCGTTCAC CAGCCTCTTA GGGACGATTA TTATGGTCGA TGTTGGCATC
AAAGCCTTCT TCATGCTCCT GGTCGGATTG AGCTGGCGCG ATTTCTACGG ACCCAAAGAG
CGATTCGTCT CCGAAGTGCG CGGCGCTACC GACTACGAAC TGTTCAACAT CGGTCTGGCA
TTACAACGCA AAGGCATGTG GTGGATGGCG ATGAAGCAGT GGGAAGCGGC GGTCGCCAAC
TCGCCGCGCG ATGTCGATTA CCTCCACGCC CTGACCGTCG CCTACGCAAA GCTTGAGCAG
TGGGATAAGG CGCGTGAAAC GATTGCCAGA GCGATCACTG TTGCGCCGGA CAATCAGGCG
CTGAAACAGG TGCAGGAGCG TATCGAGCGA ATGAGCGCGG CGTAG
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| Protein sequence | MTTTTNDWLQ QGIAAARAGQ RAQARQFFVR AIQENQYNDD AWVWLAGVVD NPADMRRCLQ
QALRINPLNP QARQGIAWLD RQTRQAQKAS SSATNMNDGQ KPSSSATAHS SVQAENQVDK
TSSQNQSHSP ATDGSLSVSQ SSASAKPASA HDSHAPGTPE PAPKPARRFS WFGKSKPAHS
AVADDSATVA AAPQPARRFS WFDRSAAPTT PDEAAGGAHG AKPARRFSWF GKSKPAHSAV
ADDSATVAAA PQPARRFSWF DRSAAPAAPA TPDEAPGAAS TAQPARRFSW FGKSNAVAKP
MVAAAATATV AGAAGATPPA SAAPPAAPGA KPRRKEKVLP PEEGDPARDC CPYCGELNKP
DRQWCRRCDR SLMIRGPVRD QRSPWLSILG ILWVLGGVLG ILGAIAGLIV ALALYNSARG
SLSDFPLVIV VVFVIIALLY GGQIAIARAM MNRARWAYWI IAVVTVLQLG GSLFGALGAI
ATIGNFITQA QAFLPSQEAV SAVAAFTSLL GTIIMVDVGI KAFFMLLVGL SWRDFYGPKE
RFVSEVRGAT DYELFNIGLA LQRKGMWWMA MKQWEAAVAN SPRDVDYLHA LTVAYAKLEQ
WDKARETIAR AITVAPDNQA LKQVQERIER MSAA
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