| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0749 |
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| Symbol | |
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| ID | 5538215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 979788 |
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| End bp | 980921 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640892905 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001430888 |
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| Protein GI | 156740759 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00160623 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0661529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGT CATGTCTTCA GGAGAATTTG AAACGCGGTC TCGCCGTTGT CAGTCACGCG
GTCGCCGGGA AAAGCACGCT GCCGGTTCTC AGCAATATCC TGATAGCCAG TGATGACGGG
CGCCTCAAAC TTGCTGCGAC GAATCTCGAG ATTGGAATTA CGTGCTGGAT CGGCGCCAAA
ATCGAAGAGG AGGGCGCTGT CGCCGTACCG GCAAAACTGT TGAGTGATGT CGTCGGTAGT
TTGCCCAATG ACCGGATTGA CCTTACGCTC GATGGGCGCA CACAAACATT GAACCTGAAA
TGCGCCCGCT TTGAGAGCAA TATCAAAGGG ACAGAGTCCG GTGAGTTTCC CGCCATTCCA
ACGGTGGATA ATCGCACGCC AACCGCTGTC TTCCCGCCAA CATTGCTCCG TGAGACGATC
CAGCAGGTGG CGTTCGCTGC CTCCACCGAG GAAACGCGCC CGGTGCTCCA GGGGGTGCAA
CTCCGCCTGC GCGACAACCG CGCGATCTTT GCCGCCGCCG ACGGTTTCCG GCTGGCGCAG
CGGATCGTCG AATTGCCGGA ACCGGTCGCC CAACCACAGG ATCTGATCAT TCCGGCGCGT
GCGCTGAATG AACTGGCGCG CATCCTCAAT GACGACGAGA GCCAGGTCGA GATGATTGTC
ACCCATAGCG GCGGGCAGGT GCTCTTCCAT ACCAGCACGG TCGATCTAGT CTCACGTCTG
ATCGACGGCA AGTACCCTGA TGTCGATCGG GTGATTCCAC AGCAGTACCA GACGCGCGCC
GTCCTCGACA CGCAGGAGTT GACGAAGGCG GTCAAACTGG CATCCTACTT TACGGTTGCT
CCATCAAATA GTGTGCGCCT GCACATGGAA CCCGGCGGCG ACCTGGGACC GGGGCGTATG
ACGATTAGCG CCAATGCGGT CGATGTTGGC GACAACAAGG GGCAGGTCGA TGCCATGATC
GAAGGCGAAG GCGGGCAGAT TGCTTTGAAT GTCAAATTTC TGTCCGATGC GATTGCCGCG
ATCCCGACGC CGCAGCTGGC GCTGGAAACG CAGTCGCCGC AACACCCGGC AGTGTTTAAG
CCCGTCGGCG CCGATGGCTA TATTCACATT GTCATGCCGA TGACGGTGCG CTGA
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| Protein sequence | MKLSCLQENL KRGLAVVSHA VAGKSTLPVL SNILIASDDG RLKLAATNLE IGITCWIGAK
IEEEGAVAVP AKLLSDVVGS LPNDRIDLTL DGRTQTLNLK CARFESNIKG TESGEFPAIP
TVDNRTPTAV FPPTLLRETI QQVAFAASTE ETRPVLQGVQ LRLRDNRAIF AAADGFRLAQ
RIVELPEPVA QPQDLIIPAR ALNELARILN DDESQVEMIV THSGGQVLFH TSTVDLVSRL
IDGKYPDVDR VIPQQYQTRA VLDTQELTKA VKLASYFTVA PSNSVRLHME PGGDLGPGRM
TISANAVDVG DNKGQVDAMI EGEGGQIALN VKFLSDAIAA IPTPQLALET QSPQHPAVFK
PVGADGYIHI VMPMTVR
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