| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0736 |
|---|
| Symbol | |
|---|
| ID | 5538202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 962721 |
|---|
| End bp | 963785 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640892892 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_001430875 |
|---|
| Protein GI | 156740746 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
|---|
| TIGRFAM ID | [TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCCT TCTTCACGAC AGTGCGATTG GGAGTTGTTG TTCTTGCCGC CGGTGAAGGC
ACTCGTATGC GGTCGGCGCT GCCGAAGGTA TTGCATCCGC TCTGCGGGCG GCCGCTGATC
GGTCATATTC TCGCGGCGGT GGATGCGTTG CAACCGGCAA TCGGCACGAT TGTGCTCGCT
TCTGATGCGC TCGACACAGT CCGCGCGCGT TTTGGCGACA CGTATCGATA CGTGGTCCAA
TCTGAACGTC TTGGCACCGG GCATGCAACC CTTCAGGCGC GTTCGATCAT GGTTAATCAG
TGCGACGATG CGCTGGTGCT GGTTGGTGAT GCGCCACTGA TCCGCAGCGC CACGCTACAA
CGCCTCGTGG CGTTGCGCCG CGAACAGAAT GCTCTGGTAG CACTGCTCAG CTTTACGGCA
GACCCGCCAA CCGGCTATGG TCGGGTCATC CGTGATGCAG AGGGGAATGT GACCGCGATT
GTTGAAGAGC GTGACGCAAC CGATACCCAA CGCGCCGTGA CTGAGGTCAA CAGTGGCATC
CTGTGCTTCG ATGCCGCCTG GATGTGGCCC GCGCTCGACC GTATCCAGCG CAGTCCTGTC
AAAGGCGAAT ACTACCTGAC GGATCTGGTT GCGCTGGCGA TTGCCGATCA CGGCATCGGC
GCAGTGCAGG CGCTCCGCGC TGACGATCCG TCAGAGACGC TTGGCGTCAA TGATCGGGTG
CAACTGGCGC AGGCAGAGCA CGTTTTGCGT CTGCGCCTGC TCGATGCGCT CATGCGCAGC
GGGGTGACGG TTGTTGACCC TGCCGCAACC TATGTGGATG TCGATGTCGT TGTCGGGCAG
GATACGACCC TGTTGCCGGG AACGATGTTG CGTGGCGCGA CCCGCGTGGG CGCCCGCTGC
ACCATTGGTC CGCACACATC ACTGATTGAT ACGATTGTTG CTGATGACGC GCATGTGCGC
TACACGCTCG CCGAAGGGGT CGTGATACCG GCGCATGCCG TCATCGGTCC GTTTGCCCAT
CTGCGCGGCG CGCAGCATGC AGTTGACGAA GTCTATCAGG CGTAA
|
|---|
| Protein sequence | MIPFFTTVRL GVVVLAAGEG TRMRSALPKV LHPLCGRPLI GHILAAVDAL QPAIGTIVLA
SDALDTVRAR FGDTYRYVVQ SERLGTGHAT LQARSIMVNQ CDDALVLVGD APLIRSATLQ
RLVALRREQN ALVALLSFTA DPPTGYGRVI RDAEGNVTAI VEERDATDTQ RAVTEVNSGI
LCFDAAWMWP ALDRIQRSPV KGEYYLTDLV ALAIADHGIG AVQALRADDP SETLGVNDRV
QLAQAEHVLR LRLLDALMRS GVTVVDPAAT YVDVDVVVGQ DTTLLPGTML RGATRVGARC
TIGPHTSLID TIVADDAHVR YTLAEGVVIP AHAVIGPFAH LRGAQHAVDE VYQA
|
|---|
| |