Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0734 |
Symbol | |
ID | 5538199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 959306 |
End bp | 960385 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892889 |
Product | threonine aldolase |
Protein accession | YP_001430873 |
Protein GI | 156740744 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCCA AACCAATCGA TCTTCGGAGC GACACGGTAA CATTGCCCAC CCCGGCGATG CGCACGGCAA TGGCGCGCGC CGAAGTGGGT GATGACGTGT ATGGCGAAGA CCCGACGATC AACCGACTGG AAGAATTCGC GGCGCAGCGC GTCGGCAAAG CGGCAGCGAT GTTCGTCCCC AGCGGCACGA TGGGGAATCT CTGCGCACTG CTGGCACACT GCCAGCGTGG AGATGAAGTG ATTGTCGGTG ACGCATCACA CATCTACAAC TATGAGGCAG GAGGAGCCTC GGTAGTGGGA GGTGTGGCAT TCCATGTCCT CCCCAATCAG CCCGATGGAA CCATCGCGCT TGATCACCTG CGCGCAGCCG TGCGCTGGCT CGACGACCCG CATTGCGCCG AGACGCGGCT GATCTGCCTG GAAAATACGC ACAACAGTTG TGGCGGCGTG GCGCTATCGC CGGAATACCT GGCATCCGTC GCAGCATTCG CCCGCGAACG CGGTCTGCTG GTGCATCTCG ACGGAGCACG TATGTTCAAC GCTGCAATAG CGCTCAGCGT AGATGTTACC GAACTGACAC GCCATGTGGA TAGCGTCATG TTCTGCCTGT CGAAAGGTCT GGCGGCGCCG GTAGGGTCAG TCGTTTGCGG CGATGAAGCC TTCATCCGGC GCGCCCGACG CGCGCGCAAG GTCCTGGGTG GCAGCATGCG CCAGGCAGGT GTGATTGCCG CAGCAGGCAT CGTCGCGCTG GAAACGATGG TAGACCGGCT GGAGGAGGAT CACGCGAATG CGCGGATGCT TGCGGAGGGT CTGGCAGGTT TCCCTCAGAT TGTGATCGAG CCTGAGCGCG TGCAGACCAA CATCGTCATC TTTACCCTGC GCGATGGCAT ATCCGCCGAG GAATTCGTCG TGCGCCTGCG CGAGCGTGGC GTCCTGATGG GAGATATGGG AGGCGGGCGG GTCCGCGCTG TTACCCACTA TGGTATCGAT GCCGGGGATA TTACCGAAAC GCTTGCGGTG GCGGAAGAGG TATTGAGGGC GGGATCAGGA GTCAGGGATC AGGGGTTTCC ATTGCATTAA
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Protein sequence | MPSKPIDLRS DTVTLPTPAM RTAMARAEVG DDVYGEDPTI NRLEEFAAQR VGKAAAMFVP SGTMGNLCAL LAHCQRGDEV IVGDASHIYN YEAGGASVVG GVAFHVLPNQ PDGTIALDHL RAAVRWLDDP HCAETRLICL ENTHNSCGGV ALSPEYLASV AAFARERGLL VHLDGARMFN AAIALSVDVT ELTRHVDSVM FCLSKGLAAP VGSVVCGDEA FIRRARRARK VLGGSMRQAG VIAAAGIVAL ETMVDRLEED HANARMLAEG LAGFPQIVIE PERVQTNIVI FTLRDGISAE EFVVRLRERG VLMGDMGGGR VRAVTHYGID AGDITETLAV AEEVLRAGSG VRDQGFPLH
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