Gene Rcas_0734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0734 
Symbol 
ID5538199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp959306 
End bp960385 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content61% 
IMG OID640892889 
Productthreonine aldolase 
Protein accessionYP_001430873 
Protein GI156740744 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCCA AACCAATCGA TCTTCGGAGC GACACGGTAA CATTGCCCAC CCCGGCGATG 
CGCACGGCAA TGGCGCGCGC CGAAGTGGGT GATGACGTGT ATGGCGAAGA CCCGACGATC
AACCGACTGG AAGAATTCGC GGCGCAGCGC GTCGGCAAAG CGGCAGCGAT GTTCGTCCCC
AGCGGCACGA TGGGGAATCT CTGCGCACTG CTGGCACACT GCCAGCGTGG AGATGAAGTG
ATTGTCGGTG ACGCATCACA CATCTACAAC TATGAGGCAG GAGGAGCCTC GGTAGTGGGA
GGTGTGGCAT TCCATGTCCT CCCCAATCAG CCCGATGGAA CCATCGCGCT TGATCACCTG
CGCGCAGCCG TGCGCTGGCT CGACGACCCG CATTGCGCCG AGACGCGGCT GATCTGCCTG
GAAAATACGC ACAACAGTTG TGGCGGCGTG GCGCTATCGC CGGAATACCT GGCATCCGTC
GCAGCATTCG CCCGCGAACG CGGTCTGCTG GTGCATCTCG ACGGAGCACG TATGTTCAAC
GCTGCAATAG CGCTCAGCGT AGATGTTACC GAACTGACAC GCCATGTGGA TAGCGTCATG
TTCTGCCTGT CGAAAGGTCT GGCGGCGCCG GTAGGGTCAG TCGTTTGCGG CGATGAAGCC
TTCATCCGGC GCGCCCGACG CGCGCGCAAG GTCCTGGGTG GCAGCATGCG CCAGGCAGGT
GTGATTGCCG CAGCAGGCAT CGTCGCGCTG GAAACGATGG TAGACCGGCT GGAGGAGGAT
CACGCGAATG CGCGGATGCT TGCGGAGGGT CTGGCAGGTT TCCCTCAGAT TGTGATCGAG
CCTGAGCGCG TGCAGACCAA CATCGTCATC TTTACCCTGC GCGATGGCAT ATCCGCCGAG
GAATTCGTCG TGCGCCTGCG CGAGCGTGGC GTCCTGATGG GAGATATGGG AGGCGGGCGG
GTCCGCGCTG TTACCCACTA TGGTATCGAT GCCGGGGATA TTACCGAAAC GCTTGCGGTG
GCGGAAGAGG TATTGAGGGC GGGATCAGGA GTCAGGGATC AGGGGTTTCC ATTGCATTAA
 
Protein sequence
MPSKPIDLRS DTVTLPTPAM RTAMARAEVG DDVYGEDPTI NRLEEFAAQR VGKAAAMFVP 
SGTMGNLCAL LAHCQRGDEV IVGDASHIYN YEAGGASVVG GVAFHVLPNQ PDGTIALDHL
RAAVRWLDDP HCAETRLICL ENTHNSCGGV ALSPEYLASV AAFARERGLL VHLDGARMFN
AAIALSVDVT ELTRHVDSVM FCLSKGLAAP VGSVVCGDEA FIRRARRARK VLGGSMRQAG
VIAAAGIVAL ETMVDRLEED HANARMLAEG LAGFPQIVIE PERVQTNIVI FTLRDGISAE
EFVVRLRERG VLMGDMGGGR VRAVTHYGID AGDITETLAV AEEVLRAGSG VRDQGFPLH