| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0732 |
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| Symbol | |
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| ID | 5538197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 954522 |
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| End bp | 956960 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640892887 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001430871 |
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| Protein GI | 156740742 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.113199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAA AGCGCCATCC TTTCCCCTGG CAGGCATCTG TTCTGCTGAT CTTCGCCGGT
GCGCCGCTCA TTGCGGGAAC CATCAGTTTC ATCAGTGCGC TCAACCTCCT TGGGCAGCCA
TCGATCGGCA TTCTGCCGTT GTGGCAGGGT GCGATCAGGT GCAACGCCGT GTCGCCGATT
ACGCCGCCGT CCTGGCCCGG CATGGCAAGC GGCGCGTTGC AAACCGGGGA TTGCATCGAG
ATGATCAATG ACGTTTCAGC ACTTACGTGG CCATATAGGG AGTTGGAGCG CTATGCCGAT
AGTCACAACC AGAGCAATCT GGTCGATCTC ATCATTCGTC GCGGCGGCGA GCCGCTGATA
GTTCGAGTGC CGGTGCTGCG GTTGACGTGG CTCCACGTGC TTCAGTTGCA GGCGGGAATC
ATCCCGATCA TTCTGGTTGT CTGGACGCTG GCGCTCGTCG TACTGCTGGC GCAACCGCAC
ACCGAGGCGA ACCGGGTGTT CGCCGCACTG TTCCTGGTGC TGGCGCTGGC GATTGCCGGG
CTGTTTCACG GGTTGAACGA TGCAGAGGGA CGGTATTACA CTGCCTTCAC TATTGTGAGC
AGTATGGCGT GGATTGGACC GCTGCTGCAT CATCTGGCGC TGCTGACGCC GCGACCACTC
CCGCGATTTG CATTTTTGCG CTTCGCGCTC CATCCCATTG GTCTGGCAGC AATGACCCTG
CATCTTGACA GCATGCTCGA ATTTGTGCCA CTCCTTCAGC CATGGCGCGG TTCCGCGCCC
GGAGTCGCCA GTGCGATCAA CGGCGTCACA ATGCTGATCG GGCTGGCAGC GTTTCTGGGA
CGGGTAGGGT TCTGGGCATG GCGCGGCGAC CGCTCAATTG CCGATCAGAT GTGGGTGTTG
TTGATGTCGT GGGGACTCGG CGCAGGACCG CTGACCCTGG CAAGCGCGTA TTATCTACTG
ACATACCGCG CGCCCTTGTG GACTTCGCTT CAGCCATTCC TCTTTTGTCT GCTCATCCTC
TGCACCGGCA CAGCCTATGC AATGCTGCGC TACCAGAGTT TCGCGTATCG CGGGCGCGTT
CTGAACGTCC TGGCGATGAT CTACCTGAGC GCTGCCATCG CGTGCGTTGT GATGGTTATT
GTTCTGATCG GCATCTTCCG CACACCGGTT GACGGCTTGC TGTTTATGGC GCTCTGGAGC
GCAACATTCG CAACCACTCT CTTCTGGCAC ACCGACAGTC CGTTTCGTCG TCTGTATCGA
CGCTTTTTCC TGCGGCACCA GCATCACTAC CAGGCAACGC TCGACTTTGC GACGCGCATG
AACCAGACAT CTGACCTCGA TGCCTTGGTG CAACAGGGCG CTACACTGAT ACGCCAGGCG
GTGATGTCGG ATTGGGTTGC GGTACGCCAC GCGCTTGCGT CGGATCGGAT ATGGCTGGCG
ACCGCGACGA TCATCGAGAT ACGCCAGGCG AATCCGCCGC ATGCCGATAC AACGTGCCTT
CCTGAAACGC CTGCGGTCAT CTGTCAACTC GCCAGCGAAG GAGAACTGCT GGGAACCCTG
TATGTCGGAG CGCGTCACGT ACCGGAACCG CTCGATGAAG AAGATGAACG TCTGATCGGC
CTGCTGGCAA CCATGCTGGC ACATGCCATG CATATTCGCG CACAAATTCA ACGTCTCTCA
GAAGTGCCGG CATTGATGAT TGCGGCGCAG GAACAGGAAC GTGAGCGCAT TGCGCAGGAG
ATTCACGACG GCGTCCTGCC AGTGTTAGGC GCTCTTCCGT TTGGGCTGAC ACAGATCGAA
CAGAGCGTGC AGACAGGCGC TCCCGCAGAT ACCATCATCT CGATATGCGA AGCATACCGG
GAGCGCGCTG TCAGAACGAC CAGGGAACTG CGCAGTATTC TGCGCCATCT GCAACCGCCG
ATTGTTGGCG GAACGCACCT GGGTCTTTCT ATCCAGGCGT TTACGCAGGA AATCTGCAAT
CTCTACCAGG TTCAGGCGAC GATCCATGGC GCCACGGTGG TCTATCCGCT AGACGAATTC
ACCTCGCGCC ATGCCTACCG GATCATCCAG CAGGCGATTG TCAACGCGCT GCAACATGCG
CGCCCGGATC GATTGGATGT GTCTATCGAG GCAGAGCAGC ATGGATGGAC GTGCCGCGTC
TCAGACAACG GGCATGGCTT CGATCCCCAA CAGTCATCGC AGACAAACGG TTTCGGCATC
TTCTCGATGC GCGAGCGAGC GCGGATCATT GGCGCCACGC TGACCATCGA ATCACAGCCG
GGGCAGGGAA CAACCGTGAC CCTGCGGGTG AAGGGCAAAA AGAGAGAGGG CAGAAAGGAG
AGCGGCGCGT TGAACATTGA AGGTGGGCAG AGCACGCCGT TGCGCTACAG CAGCGAAGCA
TTGCGCGTTG AAAATGAAAG CACAAGGATC GCCTCATGA
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| Protein sequence | MDTKRHPFPW QASVLLIFAG APLIAGTISF ISALNLLGQP SIGILPLWQG AIRCNAVSPI
TPPSWPGMAS GALQTGDCIE MINDVSALTW PYRELERYAD SHNQSNLVDL IIRRGGEPLI
VRVPVLRLTW LHVLQLQAGI IPIILVVWTL ALVVLLAQPH TEANRVFAAL FLVLALAIAG
LFHGLNDAEG RYYTAFTIVS SMAWIGPLLH HLALLTPRPL PRFAFLRFAL HPIGLAAMTL
HLDSMLEFVP LLQPWRGSAP GVASAINGVT MLIGLAAFLG RVGFWAWRGD RSIADQMWVL
LMSWGLGAGP LTLASAYYLL TYRAPLWTSL QPFLFCLLIL CTGTAYAMLR YQSFAYRGRV
LNVLAMIYLS AAIACVVMVI VLIGIFRTPV DGLLFMALWS ATFATTLFWH TDSPFRRLYR
RFFLRHQHHY QATLDFATRM NQTSDLDALV QQGATLIRQA VMSDWVAVRH ALASDRIWLA
TATIIEIRQA NPPHADTTCL PETPAVICQL ASEGELLGTL YVGARHVPEP LDEEDERLIG
LLATMLAHAM HIRAQIQRLS EVPALMIAAQ EQERERIAQE IHDGVLPVLG ALPFGLTQIE
QSVQTGAPAD TIISICEAYR ERAVRTTREL RSILRHLQPP IVGGTHLGLS IQAFTQEICN
LYQVQATIHG ATVVYPLDEF TSRHAYRIIQ QAIVNALQHA RPDRLDVSIE AEQHGWTCRV
SDNGHGFDPQ QSSQTNGFGI FSMRERARII GATLTIESQP GQGTTVTLRV KGKKREGRKE
SGALNIEGGQ STPLRYSSEA LRVENESTRI AS
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