| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0729 |
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| Symbol | |
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| ID | 5538194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 952381 |
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| End bp | 952956 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892884 |
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| Product | SNARE associated Golgi protein |
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| Protein accession | YP_001430868 |
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| Protein GI | 156740739 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1238] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGAAG CAGGAAGCCA GGCGACCGGC AAGCAAAACG CAATTCCAAC CCGCCGGCGC
GCCTGGATGC GTCCGGTGCT GGTTGCTGCC ATCGCCATTA CGCTGAATAT CATCGCCTAC
CTCACGATTC CGCCGGATCT GGCTTACCGT CTGGGAGCGT TTGGTTATCT TGGAGTCTTT
TTGATCACGC TGATCTCCAA CGCCACCATT GTGATCCCAA TTCCTTATTT CGGTCTGGTT
GCGGCGCTTT CCCCTGGCTT GAGCATGGTC GGGGTTGGCA TTGCAGGCGC GCTCGGTTCG
GTGATTGGCG AGTCGGTCGG ATTTTTCGTG GGACGGTCGG GGCGCGGCGT GGTGGAACAG
ACGCGGTTCT ACCGTTGGGT GCAACGGCAA CTCGAACATC CCTGGCGCGC ATTCTTCGTG
CTGTTTGCGC TCTCGGCGCC GCCCAACCCT GCGTTCGATG TGGCAGGAAT CACGGCAGGA
GCCATGGGGC TGCCGTACTG GATCTTCCTC ATCGCCGTCT TTCTGGCGCG ACTCGTGCGC
TTTGGCATGA TCGCGCTCTT CGGCGGAGCG ACATAG
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| Protein sequence | MSEAGSQATG KQNAIPTRRR AWMRPVLVAA IAITLNIIAY LTIPPDLAYR LGAFGYLGVF
LITLISNATI VIPIPYFGLV AALSPGLSMV GVGIAGALGS VIGESVGFFV GRSGRGVVEQ
TRFYRWVQRQ LEHPWRAFFV LFALSAPPNP AFDVAGITAG AMGLPYWIFL IAVFLARLVR
FGMIALFGGA T
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