Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0716 |
Symbol | |
ID | 5538181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 938943 |
End bp | 939716 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892871 |
Product | hypothetical protein |
Protein accession | YP_001430855 |
Protein GI | 156740726 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTCC ACGTCGATGA TGTGTTTGCT TCCTTCGACC GGGACCACGC CCTGGAGCGG CTGGCGGGAG GCAATGAGAC TGAGGTGTAC TGGACCGACG ACCGTCGCTA TGTCGTTAAA CTCAAGTATG ATCTGGGGGG CGATCTGAGT CAGGCGCTGC GATGGGCGCG GTTGATGCGC GATGTTGCTG AACATTATGC GGCGTGCCTT GGCGAGTGGC ACACAATCCC CAACTATTTT ATTGTTGCGC GTGGCAGCGA TGGGCGTATC TATCCGCTGA CGGTCCAACC CTTCCTTCCC GATGCCCAAC CGCTCGATGC ACTCGACTAT CAGGCGTTGA CGCCGGAGCA GCGCGCGCTC GTCGCTCTTC AGTTGAGCGA CATTCTGTGT CGGGCGCGCG CATTCTATCG CGCGACCGGC AGCATGCCCG ATCTCTATGG GCGATCCGCC GGCAGTCACG ATGAACGCGA GCGGATGAAG GCGCTCGACC GTTTGCCGCA GCGACTGTGG AGTTTTCTTG TCGAGCGCAC GCTGCTGCGG TCGCACAATC TGATGCTGTT GCGCGATCCA GAGATGCGGA TTGTGCTGAT CGATTACGAT CCGGTGCGTC GAGGTCGCCT GTATCGCCTG GTCTATTTTG CAGCCCGCTG CATGCTGTTG CTGCGCGACT TCGCGGCGCT CGCGTGGCTG CGCCGAAGTG CAAGACGCGA CAGAGTGCGT GCAGCGCAGA CGCTGGCGCC GCATGCATCC GTATCCGCGT CCGATCCGTC ATGA
|
Protein sequence | MTLHVDDVFA SFDRDHALER LAGGNETEVY WTDDRRYVVK LKYDLGGDLS QALRWARLMR DVAEHYAACL GEWHTIPNYF IVARGSDGRI YPLTVQPFLP DAQPLDALDY QALTPEQRAL VALQLSDILC RARAFYRATG SMPDLYGRSA GSHDERERMK ALDRLPQRLW SFLVERTLLR SHNLMLLRDP EMRIVLIDYD PVRRGRLYRL VYFAARCMLL LRDFAALAWL RRSARRDRVR AAQTLAPHAS VSASDPS
|
| |