Gene Rcas_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0713 
Symbol 
ID5538178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp935682 
End bp936245 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content58% 
IMG OID640892868 
Producthypothetical protein 
Protein accessionYP_001430852 
Protein GI156740723 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.273172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.667416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCG TTGTGAGGAC GACCGTTCCA TGTGCTACAA TAATGCCTAT GAGGGTACGA 
AGCGTTGTCC ATTCGCCGCA TGTCCTCGAT TTTGTTTCGC ATAGCGTCGC ACAGACGATA
CGCATTGGTC AGCGCCTGGG TGAGTTGTTG CAACACGGCG ATGTTGTGGC GCTTCGCGGC
GATCTTGGCG CCGGGAAAAC GCACCTGATC AAGGGGATCG TTCAGGGTCT CGGCTCGACC
GATGTGGTCA ACAGTCCAAG TTTCGTGCTG ATCAATCAGT ATCGTGCCGG CGCACAGCGT
GGTGGGATGC CGATTTACCA TGCCGATCTC TACCGTATTG AGCGACCTGC TGAACTGTAC
GGCGTTGGGT TGGAAGAAGC GCTCGACGGT GATGGTGTGT GTCTGATCGA GTGGGCAGAG
CGCGCGGAGG CCTTGTTGCC CGACGATCGG CTCGATGTGC ATCTCAGCCA CCTGAGCGAG
ACGAAGCGCG TGGTGCGTTT CACGCCGTGC GGTCGGCGGT ATGAAGCGCT GGTCGATACG
TTGAAGAAGA CGGCGTTCAC CTGA
 
Protein sequence
MAVVVRTTVP CATIMPMRVR SVVHSPHVLD FVSHSVAQTI RIGQRLGELL QHGDVVALRG 
DLGAGKTHLI KGIVQGLGST DVVNSPSFVL INQYRAGAQR GGMPIYHADL YRIERPAELY
GVGLEEALDG DGVCLIEWAE RAEALLPDDR LDVHLSHLSE TKRVVRFTPC GRRYEALVDT
LKKTAFT