| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0706 |
|---|
| Symbol | |
|---|
| ID | 5538171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 926930 |
|---|
| End bp | 927289 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640892862 |
|---|
| Product | DNA polymerase beta subunit |
|---|
| Protein accession | YP_001430846 |
|---|
| Protein GI | 156740717 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00655173 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAGGC CATCCTTGAG TTCTGTCGTC ATCAAATCAG TTGATCGAGC ACGTGTCGAG
CAGGCTGTCA GGGAGTATGC GGCTCGCCTG TTTGCAGCAC ATCCGGAGAT TGAGCGCATC
ATCTGGTTCG GCTCGTGGAT CAACGGCATT CCCAGTCCCG GAAGCGATGT TGACCTGTGC
CTGATCCTCT CCTCAACGGA TAAGCCGATG CACGAACGCG CCGTCGGCTT TCTGCCGGTT
GGCTTCCCGG TGGGCGTTGA TCTGTTCGTC TATACGCGTG CTGAGTTTGA GCGTCTCCAG
GCGGAATACC CCGGCTGGTT CCGGGCGATT GCTTCCGGCA GAGATCTGGC GGCGTCCTGA
|
|---|
| Protein sequence | MRRPSLSSVV IKSVDRARVE QAVREYAARL FAAHPEIERI IWFGSWINGI PSPGSDVDLC
LILSSTDKPM HERAVGFLPV GFPVGVDLFV YTRAEFERLQ AEYPGWFRAI ASGRDLAAS
|
|---|
| |