| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0696 |
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| Symbol | |
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| ID | 5538161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 915103 |
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| End bp | 915738 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892852 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001430836 |
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| Protein GI | 156740707 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000147428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000446652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACAATC GATACTCCGA CGAGCACATC TCCACGGCAG CGACTGCCTA CACCGACACC
CCTGACGACC ACGTGCTGAT TGCGGCGATT GCCGAAGGTG ATAGCAGCGC GCTCGAGGCG
CTCTATGATC GGTACTCGTC GGTAGTGTAC CGCATGGCGT TGCGGATGCT GAAAAACCGC
GAACTGGCGG AGGAGGTTGT CCAGGAAGTC TTCTGGCGGG TCTGGCGGCG CAGCGCCAGT
TTCGATAATG AGCGCGGGCG TGTGGCGCAG TGGCTGTTCG GCATTGCGCA CAATCTGTGT
ATCGATGAAT TGCGTCGCAT GCGTGCCCGC CCGACCCAGA TTTACGAGGA TGTCGATCAT
CCGGTTATTC AGCAACTGGC GGATGAGCAG ATCGATGTGC CGGAGGCTGC GTGGGTGTTC
GAGCAACAGC GGGTCATTCG TGATGCCCTT GGTCATTTGC CGGAGGCGCA GCGTCAGGCG
GTCGAACTCG CATATTTCGG CGGTCTGTCG CACCAGGAGA TTGCGACAAA ACTCAATCGA
CCGCTCGGTA CGATCAAGAC GCGCGTGCGG TTGGGGTTGC AGAAACTTGG CACATTGTTG
ACGGCGCGCG GGTTGCAACC AGGGGATGCA TCGTAG
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| Protein sequence | MDNRYSDEHI STAATAYTDT PDDHVLIAAI AEGDSSALEA LYDRYSSVVY RMALRMLKNR
ELAEEVVQEV FWRVWRRSAS FDNERGRVAQ WLFGIAHNLC IDELRRMRAR PTQIYEDVDH
PVIQQLADEQ IDVPEAAWVF EQQRVIRDAL GHLPEAQRQA VELAYFGGLS HQEIATKLNR
PLGTIKTRVR LGLQKLGTLL TARGLQPGDA S
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