| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0678 |
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| Symbol | |
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| ID | 5538143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 886321 |
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| End bp | 887295 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892836 |
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| Product | ROK family protein |
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| Protein accession | YP_001430820 |
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| Protein GI | 156740691 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0268502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00659197 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGATC CGACGCCGCT CATCCAGGAG CGATTATCAC AGAACCGCTG GGGGTTGCTC
GGCGGTCAAG GGTGCGTTCT CGGATTCGAT GTCGGCAGTT ATGGATTGCG AGCGGCGCTG
GTAGATCTGA GTCGTCACAC CTATGTCAGC GCACACCGTG AGCCAGAGCG TGAGACGCCA
CAAGAACTCG TGGGAGGTGC GATTGATCTG GGGAATGAGA TCTTGACGAT GCATGGCGTC
ACATCCGCCC ACCTGGTCCG TGTCGGAGCA GGATTCGGCG GACCGGTGGA TGTGCGTCAG
GGGATTGTCT TGCTGTCGCC GCGCATGTCC GGGTGGGAAC GCTATCCGCT GCGAGAAGCA
TTCGAGAATG CGTTCGGCGC AACGTGCCTG GTCGATAACG ATGCCAATCT CATCGCTCTG
GCAGAAGCGA CTTTTGGGGT AGGACGCGAC ACGCAACACA TGGTCTACAT TCACCTGAGC
ACTGGTGTTG GCGCTGGTCT CGTGCTCGAT GGGCGCCTGT ACCATGGCGC CACCACAACA
GCGGGTGAGA TTGGGCACGC GGTGGTCGGT CCGGTCGATC CAACGCGACC CGGTGAGCGA
CCCAAAACCC TGGAAGAGCA CGTATCGATC AAAGGGTTGC TGAATCGCGC AGCAGAACTT
GGACTGCACA CGAACCTGCT GAGCGATATT TTCAGCGATC ATCCCGCAGC ACAACAGGTA
GTCGCCGAAG CCATCGACAT TCTGGCAGTG CGGATCGCGC AGATCGTCGC CCTCATCGAC
CCCCAGATGG TCGTCATCGG CGGAGTTGTT GCGCGCAACG GCGGCGACAT GTTTATCAAC
GCCATTCGGG AACGTATGCA CATGTATATT GGGCAGATGG TCGAGCGCCC GGTGCAGGTG
GTTGGCGCTG TGCTCGGTCC CGATAGCGTT GCGATTGGCG CGGTGGCGCT GGCGCTCGAA
AGCATGCGCG ACTGA
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| Protein sequence | MLDPTPLIQE RLSQNRWGLL GGQGCVLGFD VGSYGLRAAL VDLSRHTYVS AHREPERETP
QELVGGAIDL GNEILTMHGV TSAHLVRVGA GFGGPVDVRQ GIVLLSPRMS GWERYPLREA
FENAFGATCL VDNDANLIAL AEATFGVGRD TQHMVYIHLS TGVGAGLVLD GRLYHGATTT
AGEIGHAVVG PVDPTRPGER PKTLEEHVSI KGLLNRAAEL GLHTNLLSDI FSDHPAAQQV
VAEAIDILAV RIAQIVALID PQMVVIGGVV ARNGGDMFIN AIRERMHMYI GQMVERPVQV
VGAVLGPDSV AIGAVALALE SMRD
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