Gene Rcas_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0672 
Symbol 
ID5538136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp882772 
End bp883212 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content56% 
IMG OID640892829 
Producthypothetical protein 
Protein accessionYP_001430814 
Protein GI156740685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.259029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCGA AAGTCGCCGG AGGAATCATG TCGGCAGGAT GGACCGTGTA CAACGATGAA 
TCGCAGTATC GCCGCATTGT GGCGTACCTC ATGCCCGGTG AAACGCTGTA TGCCGTCTAT
GACTGCAAAG GTGTCGGAAC CGGCTTCGTC GGCATCACCG ATCGGCGCGT GATGTTCTAC
GACCAGGGGA TGCTGGCAAA AAAGCGCGCG ATGGTCTCTA TTCCCTATCA GAATATTGCG
GCTATCGCCG TCGCTGGGGG TGATCTTTCA AAGCGGCGAA ATTATCCTGC TGACGGCATT
CGGTCGGTTT GCCTTCGAGT TTCGCGGTCC CGACAAAGCC GATTGGGTCT ATCGGTTCAT
TTTGGGGCAG ATTATGGCGC CAAAACCGCC GCATCCGTCA ACAGGGTTCG GACGATGACA
TGGCATACCA ATGACCGGTG A
 
Protein sequence
MAAKVAGGIM SAGWTVYNDE SQYRRIVAYL MPGETLYAVY DCKGVGTGFV GITDRRVMFY 
DQGMLAKKRA MVSIPYQNIA AIAVAGGDLS KRRNYPADGI RSVCLRVSRS RQSRLGLSVH
FGADYGAKTA ASVNRVRTMT WHTNDR