| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0671 |
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| Symbol | |
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| ID | 5538135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 880873 |
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| End bp | 882480 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640892828 |
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| Product | putative circadian clock protein, KaiC |
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| Protein accession | YP_001430813 |
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| Protein GI | 156740684 |
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| COG category | [L] Replication, recombination and repair
[T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction
[COG0468] RecA/RadA recombinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.492648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGTCC TCAGTGCAAC ACTGTGTTAC GCCCCCGCCC CGGCGACTGC TGCGTATTCT
GCTCGTATGG CGATGATCGC TGCCCGCCGA AACAGATTCA TACCGCCAAT ACGTGACGCC
GTACACTATC ACCAACACGT TATGAGCACT GCACAATCTC TGTCAGATCA GCGTCTTTCG
ACCGGCATTC CGGGGTTGGA TGAAATCCTT TTCGGCGGTT TTCTTCCTGG CCGCGCGTAC
CTGGTGCGTG GCGGACCCGG CAGCGGCAAA ACAACGCTCG GTATGCACTT TTTGAGCGCA
GCCGCAGCGG AAGAGGCGCC ACTGTTCATC ACGCTCACCG AACCGGTTGC ACAACTCCAG
AAAAACGCTG AACGCATGGG GATCGATGTG CGGCATATTC GGTTTCTTGA TCTCAGTCCT
TCACCACAGT TCTTCACCGA AGTCGAGACC TACGACATCT TTTCTCCCGC AGAAGTGGAA
CGCGCCCCCA CTGCTCGAAA AATCACCGAG ATGGTCGAAC GTCTCAATCC ACAGCGCGTG
TTTCTCGACG CCATGACCCA GTTTCGCTAC CTCGCCAGCG ATGCCTATCA GTTCCGTCAA
CAAGTGCTGT CGTTTCTCCA TTTTTTGAAG GAACGCGGCA TCACCCTGCT CTTCACTTCT
GAAGCCAGCC CGGAGACGCC TGATGAGGAC CTGCAATTCA TGGCGGATGG CATTATCCAT
CTGCGCATGG CATCGGATAC ACGTTTTCTG GAAGTGACCA AGTTTCGCGG CTCGGCTTTT
GCCGGTGGCG CACATACCTG TAAACTTGGC GCAACCGGTA TGCAGGTGTT CCCCCGTTTG
CTACCGGATA TGAAGTATGA GCAATTGTCG ACCGAGCACA TCTCGTCAGG CGTTCCCGAA
CTGGATGCGT TGCTGCACGG AGGGATCGAA CGCAGCACGA TCACCATGCT CTGCGGACCG
AGCGGCGTGG GGAAAACCAC CCTGGGATTA CAATTCATGA AGGAGGCCGC CGGTCGTGGC
GAGCGATCCG TTGTCTATTC TTTCGAGGAG GAAGTCGATA TTATCCTCGG GCGTTGCGAA
GCGGTTGCTA TTCCGGCGCG CAGTATGATA GCGGCGGGAA CGCTACAAAT TCTGAAGATT
GAGCCGCTCC AGTACACTGC GGACGAGTTT GCGCGTCTCG TGCGACGCGA TGTGCAGGAC
CACGGGACCC GCCTGGTGAT GATCGATAGC ATTGCCGGTT ACAACCTCGC ACTTCGTGGC
GAAAACCTGG AGGCTCAATT GTATGCCCTG AGCAAATATC TGCAACACCA CAACGTGACG
CTCTTGCTGG TTGTCGAGTC AGCCGAAATC ACCGGCAATT TTCGCGTAAC CGACGGTCAT
ATCAGCTACC TTGGCGATAC TATCATCTTT ATCCGGTATC TGGAAATTCA CGGCGAGATG
CGGAAAGCAA TCGGCGTCTT GAAGAAACGT CTGAGCGATT TCGAACGAAC CCTGCGCGAG
ATTGAGATTA CATCGCAGGG TATCAAGGTT GGGGGTCCGT TGAGCAATCT CCGGGGCATT
TTGAGTGGGA CTCCTGAATG GATTTCAGAA CGGCGCGACA ATGGATGA
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| Protein sequence | MCVLSATLCY APAPATAAYS ARMAMIAARR NRFIPPIRDA VHYHQHVMST AQSLSDQRLS
TGIPGLDEIL FGGFLPGRAY LVRGGPGSGK TTLGMHFLSA AAAEEAPLFI TLTEPVAQLQ
KNAERMGIDV RHIRFLDLSP SPQFFTEVET YDIFSPAEVE RAPTARKITE MVERLNPQRV
FLDAMTQFRY LASDAYQFRQ QVLSFLHFLK ERGITLLFTS EASPETPDED LQFMADGIIH
LRMASDTRFL EVTKFRGSAF AGGAHTCKLG ATGMQVFPRL LPDMKYEQLS TEHISSGVPE
LDALLHGGIE RSTITMLCGP SGVGKTTLGL QFMKEAAGRG ERSVVYSFEE EVDIILGRCE
AVAIPARSMI AAGTLQILKI EPLQYTADEF ARLVRRDVQD HGTRLVMIDS IAGYNLALRG
ENLEAQLYAL SKYLQHHNVT LLLVVESAEI TGNFRVTDGH ISYLGDTIIF IRYLEIHGEM
RKAIGVLKKR LSDFERTLRE IEITSQGIKV GGPLSNLRGI LSGTPEWISE RRDNG
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