| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0657 |
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| Symbol | |
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| ID | 5538120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 865047 |
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| End bp | 868121 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892814 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_001430800 |
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| Protein GI | 156740671 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0383257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAT TCTTTGAGAA ACTACTCGGC TTCGGTCCTG ATCGCGCGAT CAAGCAGATC
GAGCCGATTG TGCGCCAGAT CAACAGCCTC GAACCGTCGA TCCAGACGCT TTCCGACGCC
GAACTGCGCG CAAAAACCGA TGAATTCAAG CAGCGCCTCG CCGATGGCGA GACGCTCGAT
GATTTGCTTC CCGAAGCCTT CGCTGTGGTG CGCGAGGCAG CCCGGCGCAC GATTGGTCAG
CGTCACTACG ACGTACAGTT GATGGGGGGC ATCGTACTGC ACCAGGGCAA GATCGCCGAA
ATGAAAACCG GCGAAGGAAA AACGCTGGTG GCGACCCTGC CGCTCTACCT GAATGCGCTG
ACCGGCAAAG GGTGCCATCT GGTCACGGTC AACGACTACC TGGCAAAGGT TGGCGCGGGC
TGGATGGGAC CAATCTACCA CATGCTCGGG TTGAGCGTCG CCACAATCTC GCACGAATAC
TCGGCGATCT ACGACCCGGA CTATATCGAT CCGAAGGCAA ACCCCGACGA TCAGCGCCTT
GTTCACTGGC GCCCTTGCAC GCGGCGCGAG GCGTATCTGG CGGATATCAC CTATGGAACG
AACAATGAGT TCGGCTTCGA CTACCTGCGC GACAACATGG CGTGGGACCT CGCACAACTC
GTGCAGCGTG AATTGCACTA CGCCATTGTG GACGAAGTGG ACAACATTCT GATCGACGAA
GCGCGCACGC CGTTGATCAT TTCGGGTCCG GCGCAGGAAA GCGGCGACGA ATACCGTCAG
TTTGCCGCAC TGGTGCGTCA TCTCAAACCC AGCCCCTACA CGCCCGACCA GATCAAGAAA
CAAATGATCG AAGATCCAGA GGGCGATTTT GTGATCGAGC CGCGCTCGAA AAGTGTTCAG
TTGACCGATC AGGGGGTAGC GAGGGTCGAG CGGTTGCTGA AGATTCCCGA AGGCGAATCG
CTCTACGATC CGAAATACTA TCGCCTGACC CACTACCTGG ACAATGCGCT GCGAGCGGAA
TTCATCTACC AGCGCGACCG GGATTATATC GTCGAGAATG GTGAAGTAAT CATCGTCGAT
GAGTTCACGG GGCGCAAAAT GATTGGTCGC CGCTGGTCCG ACGGTCTGCA CCAGGCGGTG
GAGGCGAAGG AAGGAGTGAA GATGCGCCAG GAAAATGTCA CCCTGGCGAC GATCACCTTC
CAGAATTACT TCCGCATGTA CCAGAAGCTG GCCGGTATGA CCGGTACGGC CTACACCGAG
CGCGAGGAGT TTGGCAAGAT CTACAATCTG GACGTTGTCG TCATTCCGAC GCACCGCCCG
ATGATCCGCA AGGACTATGA CGACCAGATT TATCGCACCG AAAAGGCAAA GTTCGAGGCG
GTCATCCGAG AGATCGAGGA GATGCACGCC CTAGGGCGCC CGGTGCTCGT CGGCACCACC
TCGGTTGAGA CGTCGGAGCG CTTGAGCGAG ATGCTGAAGC GCCGTGGCAT CAAACATCAA
GTGTTGAACG CCAAGTACCA CGAGCGCGAA GCGCGCATCG TGGCGCAGGC GGGGCGCAAA
GGCGCCGTGA CGATCGCCAC CAACATGGCG GGGCGCGGTA CCGACATTCT GCTCGGCGGC
AACCCCGATG GTCTGATCGA AGAAATCCTT GCCCGGCGTG GCATCAAAAT CGAGCAGGCG
ACGCCAGAAC AGATCCGCGA GGCGCAAGAG GAAGCGCGGC ACATTACGGA AGCCGAGGGC
AAAGAGGTGC GCGAGTTGGG GGGGTTGCAC ATCATCGGCA CCGAACGCCA CGAATCGCGA
CGCATCGACA ATCAGTTGCG CGGGCGCGCC GGTCGCCAGG GAGACCCTGG CTCGTCACGG
TTCTACCTGT CGCTCGAAGA TGATCTGATG CGGCGCTTTG GTCCGATGGA TCGCGTCAAG
GGCTTGATGG AGCGGTTTGG TGTCGATGAA AGCCTGCCGA TTGAAGCCGG GTTGATCAAC
CGCACCATCG AAAGCGCTCA AACGCGCGTT GAGGGGTACA ACTTCGATAT TCGCAAGCAC
ACGGTCGAGT TCGACAATGT GATGAACAAG CAGCGCACCG TCATCTACGC CGATCGACGC
AAAATCCTCG AAGGCGAGAA TATGCGCGAG CGGGTGCTCG ACATGATCGC CGACGAAGTG
CATGCGCTGG TTGCACGCTA CCTGCCCGAG ACCCGCGGGC GCGCCGATGA TTTCGAGGAG
TGGGACCTCG AAGGATTGGT GCGCGCCGTG CGCGCGATTG ATCCGATGTT GACCGAGGAG
AAGATTGCGC CGGAGCACCT TGAACACCTC TCGCGCCAGG AGATCGAAGA CGCGCTTATG
GAAGCGATTG AGGAAGATTA TACGGCGCGC GAGCAGGCGA TCGGCGAGGA ACGTATGCGC
TCCTTCGAGC GGCGCATGAT GCTCGGCGCG ATCGATCGGC AGTGGGTCGA TTATCTTACC
GGCATGGAAG ACCTGCGCCA GGAGATCGGG TTGCAGGCGG TGGCGCAACG CGATCCGCTC
GTTGAGTATC AGCGCAATGC CTACGCAATG TTTGAAGAGT TGAAAGCCAA CATTCAACGC
GACATTGTGT ATCAGATCAT CCCGGCATCG TTCCAGTACG AGCAGTATCT GCGCCAGGTC
GAAGCCGAGC AGCAGCGCCG TCTGATCGCT GCTCAGCATG CAGGAACGGA CGACGGCAAC
GGAAAAGTGT TGCGGACGGT TCGCCACAGT GTGCAGATGC CAGGACGCAA CGATCCATGC
CCGTGCGGCA GCGGCAAGAA GTTCAAAGCC TGCCACCTGG GGCGCGAGGC GGAACTTGTC
GCGTTGTTAC AGCAGCGCCA ACAATCGGCG CCGGTGCAGA ATGCCTCGGC GCAACCGGCA
ACAAAGCCGT CGGCTGCGGG TCAATCCGCA AACACCCCGG CGCGACCTGC ATCGAAACAA
CCGGATGCAG GTCCATCCGC TGGATCGACC GTACCGCGCG GTCGTGCAGT TCCACCAACC
GCCAATCCGC AACAGCGCAG CAAGTCTCAA CCCCAGGCGC AGCGCGGGAA GGGCGCGTCC
GCCAGAAAGA AGTGA
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| Protein sequence | MKAFFEKLLG FGPDRAIKQI EPIVRQINSL EPSIQTLSDA ELRAKTDEFK QRLADGETLD
DLLPEAFAVV REAARRTIGQ RHYDVQLMGG IVLHQGKIAE MKTGEGKTLV ATLPLYLNAL
TGKGCHLVTV NDYLAKVGAG WMGPIYHMLG LSVATISHEY SAIYDPDYID PKANPDDQRL
VHWRPCTRRE AYLADITYGT NNEFGFDYLR DNMAWDLAQL VQRELHYAIV DEVDNILIDE
ARTPLIISGP AQESGDEYRQ FAALVRHLKP SPYTPDQIKK QMIEDPEGDF VIEPRSKSVQ
LTDQGVARVE RLLKIPEGES LYDPKYYRLT HYLDNALRAE FIYQRDRDYI VENGEVIIVD
EFTGRKMIGR RWSDGLHQAV EAKEGVKMRQ ENVTLATITF QNYFRMYQKL AGMTGTAYTE
REEFGKIYNL DVVVIPTHRP MIRKDYDDQI YRTEKAKFEA VIREIEEMHA LGRPVLVGTT
SVETSERLSE MLKRRGIKHQ VLNAKYHERE ARIVAQAGRK GAVTIATNMA GRGTDILLGG
NPDGLIEEIL ARRGIKIEQA TPEQIREAQE EARHITEAEG KEVRELGGLH IIGTERHESR
RIDNQLRGRA GRQGDPGSSR FYLSLEDDLM RRFGPMDRVK GLMERFGVDE SLPIEAGLIN
RTIESAQTRV EGYNFDIRKH TVEFDNVMNK QRTVIYADRR KILEGENMRE RVLDMIADEV
HALVARYLPE TRGRADDFEE WDLEGLVRAV RAIDPMLTEE KIAPEHLEHL SRQEIEDALM
EAIEEDYTAR EQAIGEERMR SFERRMMLGA IDRQWVDYLT GMEDLRQEIG LQAVAQRDPL
VEYQRNAYAM FEELKANIQR DIVYQIIPAS FQYEQYLRQV EAEQQRRLIA AQHAGTDDGN
GKVLRTVRHS VQMPGRNDPC PCGSGKKFKA CHLGREAELV ALLQQRQQSA PVQNASAQPA
TKPSAAGQSA NTPARPASKQ PDAGPSAGST VPRGRAVPPT ANPQQRSKSQ PQAQRGKGAS
ARKK
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