Gene Rcas_0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0656 
Symbol 
ID5538119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp863445 
End bp865019 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content61% 
IMG OID640892813 
Productphosphoglyceromutase 
Protein accessionYP_001430799 
Protein GI156740670 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0696] Phosphoglyceromutase 
TIGRFAM ID[TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.474098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCTG TTCCACGTCC GCGACCGGTG TTGCTGGTCA TCCGCGATGG TTGGGGTGAG 
CGTGAAGAAG TCGAAGGCAA CGGGGTCAAA CTGGCGCGCA AGCCGTTTGA TGACCGCTGG
CGCGCCGAGT GTCCGTTCAC CCTGGTGCGC GCTGCGGAGA AAGATGTCGG TCTGCCGGCC
GGGCAGATGG GGAACTCTGA GGTGGGACAC CTGAACCTGG GCGCCGGCTT CGTGGTGCGC
CAGGATATTA CGGTCATCGA TGACTCGATT GCCGATGGAA CGTTCTTTAC CAATCCTGTG
CTTTGCAACG CTATCCGCAC CGTGAAGGAA CGCGGGACAG CGCTGCACCT GATGGGTTTG
CTCGGTCCTG GCGGCGTCCA TAGCCACGTC AACCATACCA AAGCACTCCT TGAACTGGCA
AAACGCGAAG GTCTCGAACG AGTTTACGTC CATCTGTTCA CCGATGGACG CGACACCATG
CCGCAAAGCG GGATAGAGTT CGCCCGCGAT CTGCTCGCAT TTATGGAAGA ACATCAGATT
GGGCGCGTCG CCTCGGTGGT CGGGCGCTAC TACGCGATGG ACCGCGATAA GCGCTGGGAG
CGCACGAAAC AAGCGTATGA TCTGCTGACG AAAGGTGTCG GTCGTCCCGC ACCCGATCCG
CTGACAGCGA TCCAGCGTTC TTACGACGAC GGCGTGACCG ATGAGTTCAT CAAGCCAGCC
GTGATTGTGG ACGAAGCCGG CAAACCGGTC GCCACGATTG GTAACGGCGA TGCTGTGGTG
TGCTTCAACT TCCGCGCCGA CCGGGTGCGT CAGATCAGTC GCGCCTTCAC CCTGCCCGAT
TTCGATGGCT TCGCGCGGGA GATGCTGCGT GATCTGATCT ACATTGCTAT GACCGAGTAC
GAAAAGAATA TGCCGTATCA GGTCGCTTTT CAGAACGATG ATGTCGCTGT GCCGCTGGCG
AAGGTAATCA GCGATGCCGG ATTGCGTCAA TTCCACGCAG CGGAAACCGA AAAGTATCCG
CACGTCACAT TCTTCTTCAA CGGCGGGCGC GAACAACCGT TTCCCAATGA GGACTGGCAG
ATCGTTCCAT CGCCGAAAGA GGTGCCGACT TACGACCTCA AGCCGGAAAT GAGCGCCTAC
GGCGTGCGCG ATGTGGTGCT GAAAGCCATT GAGTCCGACG CATACGATTT CATTCTGGTC
AACTACGCCA ACCCGGACAT GGTGGGGCAC ACCGGGGTCA TTCCGGCGGT GGTGAAGGCG
TGTGAGGTGG TGGACGAATG CACCGGCGCG ATTGTCGATG CCGTTGTGGC GCGCGGCGGC
GCGGCGATCG TCATGGCCGA CCATGGCAAC GCCGAACTTA TGATCGACCC GGAGACCGGC
GGACCGCACA CGGCGCACAC GACCAATCCG GTGCCGACGT ACCTGATCGC CGCTCCGGGG
TTGGGGTTGG ACAAGGGGCG GGTCGCGTTG CGCGACGGTG GACGTCTCGC CGATGTCGCG
CCGACAGTGC TCGACCTGCT GGGACTCGAA CCTGCGCCGC AGATGACGGG CAAGAGCCTG
ATTGTGCGCA CATAG
 
Protein sequence
MTPVPRPRPV LLVIRDGWGE REEVEGNGVK LARKPFDDRW RAECPFTLVR AAEKDVGLPA 
GQMGNSEVGH LNLGAGFVVR QDITVIDDSI ADGTFFTNPV LCNAIRTVKE RGTALHLMGL
LGPGGVHSHV NHTKALLELA KREGLERVYV HLFTDGRDTM PQSGIEFARD LLAFMEEHQI
GRVASVVGRY YAMDRDKRWE RTKQAYDLLT KGVGRPAPDP LTAIQRSYDD GVTDEFIKPA
VIVDEAGKPV ATIGNGDAVV CFNFRADRVR QISRAFTLPD FDGFAREMLR DLIYIAMTEY
EKNMPYQVAF QNDDVAVPLA KVISDAGLRQ FHAAETEKYP HVTFFFNGGR EQPFPNEDWQ
IVPSPKEVPT YDLKPEMSAY GVRDVVLKAI ESDAYDFILV NYANPDMVGH TGVIPAVVKA
CEVVDECTGA IVDAVVARGG AAIVMADHGN AELMIDPETG GPHTAHTTNP VPTYLIAAPG
LGLDKGRVAL RDGGRLADVA PTVLDLLGLE PAPQMTGKSL IVRT