Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0656 |
Symbol | |
ID | 5538119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 863445 |
End bp | 865019 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892813 |
Product | phosphoglyceromutase |
Protein accession | YP_001430799 |
Protein GI | 156740670 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0696] Phosphoglyceromutase |
TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.474098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCTG TTCCACGTCC GCGACCGGTG TTGCTGGTCA TCCGCGATGG TTGGGGTGAG CGTGAAGAAG TCGAAGGCAA CGGGGTCAAA CTGGCGCGCA AGCCGTTTGA TGACCGCTGG CGCGCCGAGT GTCCGTTCAC CCTGGTGCGC GCTGCGGAGA AAGATGTCGG TCTGCCGGCC GGGCAGATGG GGAACTCTGA GGTGGGACAC CTGAACCTGG GCGCCGGCTT CGTGGTGCGC CAGGATATTA CGGTCATCGA TGACTCGATT GCCGATGGAA CGTTCTTTAC CAATCCTGTG CTTTGCAACG CTATCCGCAC CGTGAAGGAA CGCGGGACAG CGCTGCACCT GATGGGTTTG CTCGGTCCTG GCGGCGTCCA TAGCCACGTC AACCATACCA AAGCACTCCT TGAACTGGCA AAACGCGAAG GTCTCGAACG AGTTTACGTC CATCTGTTCA CCGATGGACG CGACACCATG CCGCAAAGCG GGATAGAGTT CGCCCGCGAT CTGCTCGCAT TTATGGAAGA ACATCAGATT GGGCGCGTCG CCTCGGTGGT CGGGCGCTAC TACGCGATGG ACCGCGATAA GCGCTGGGAG CGCACGAAAC AAGCGTATGA TCTGCTGACG AAAGGTGTCG GTCGTCCCGC ACCCGATCCG CTGACAGCGA TCCAGCGTTC TTACGACGAC GGCGTGACCG ATGAGTTCAT CAAGCCAGCC GTGATTGTGG ACGAAGCCGG CAAACCGGTC GCCACGATTG GTAACGGCGA TGCTGTGGTG TGCTTCAACT TCCGCGCCGA CCGGGTGCGT CAGATCAGTC GCGCCTTCAC CCTGCCCGAT TTCGATGGCT TCGCGCGGGA GATGCTGCGT GATCTGATCT ACATTGCTAT GACCGAGTAC GAAAAGAATA TGCCGTATCA GGTCGCTTTT CAGAACGATG ATGTCGCTGT GCCGCTGGCG AAGGTAATCA GCGATGCCGG ATTGCGTCAA TTCCACGCAG CGGAAACCGA AAAGTATCCG CACGTCACAT TCTTCTTCAA CGGCGGGCGC GAACAACCGT TTCCCAATGA GGACTGGCAG ATCGTTCCAT CGCCGAAAGA GGTGCCGACT TACGACCTCA AGCCGGAAAT GAGCGCCTAC GGCGTGCGCG ATGTGGTGCT GAAAGCCATT GAGTCCGACG CATACGATTT CATTCTGGTC AACTACGCCA ACCCGGACAT GGTGGGGCAC ACCGGGGTCA TTCCGGCGGT GGTGAAGGCG TGTGAGGTGG TGGACGAATG CACCGGCGCG ATTGTCGATG CCGTTGTGGC GCGCGGCGGC GCGGCGATCG TCATGGCCGA CCATGGCAAC GCCGAACTTA TGATCGACCC GGAGACCGGC GGACCGCACA CGGCGCACAC GACCAATCCG GTGCCGACGT ACCTGATCGC CGCTCCGGGG TTGGGGTTGG ACAAGGGGCG GGTCGCGTTG CGCGACGGTG GACGTCTCGC CGATGTCGCG CCGACAGTGC TCGACCTGCT GGGACTCGAA CCTGCGCCGC AGATGACGGG CAAGAGCCTG ATTGTGCGCA CATAG
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Protein sequence | MTPVPRPRPV LLVIRDGWGE REEVEGNGVK LARKPFDDRW RAECPFTLVR AAEKDVGLPA GQMGNSEVGH LNLGAGFVVR QDITVIDDSI ADGTFFTNPV LCNAIRTVKE RGTALHLMGL LGPGGVHSHV NHTKALLELA KREGLERVYV HLFTDGRDTM PQSGIEFARD LLAFMEEHQI GRVASVVGRY YAMDRDKRWE RTKQAYDLLT KGVGRPAPDP LTAIQRSYDD GVTDEFIKPA VIVDEAGKPV ATIGNGDAVV CFNFRADRVR QISRAFTLPD FDGFAREMLR DLIYIAMTEY EKNMPYQVAF QNDDVAVPLA KVISDAGLRQ FHAAETEKYP HVTFFFNGGR EQPFPNEDWQ IVPSPKEVPT YDLKPEMSAY GVRDVVLKAI ESDAYDFILV NYANPDMVGH TGVIPAVVKA CEVVDECTGA IVDAVVARGG AAIVMADHGN AELMIDPETG GPHTAHTTNP VPTYLIAAPG LGLDKGRVAL RDGGRLADVA PTVLDLLGLE PAPQMTGKSL IVRT
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