| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0650 |
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| Symbol | |
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| ID | 5538113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 856636 |
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| End bp | 857865 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892807 |
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| Product | ABC transporter related |
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| Protein accession | YP_001430793 |
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| Protein GI | 156740664 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG CAATCGAATT CGAGGACGTT TCCAAACGGT TTCTATTGCA GCGTGATCGC
CCTGTGACCA TTCAGGAGCG TCTGGCAGGA TGGTTACACC CGGCTAAGGC TGCCGATGAA
TTTTGGGCGT TGCGCAACGT GAGCTTCAGC ATTGCTCGTG GTGAAAGTTT TGGACTGATC
GGGCACAATG GCGCCGGAAA GAGCACCGCG CTCAAGTTGA TGACCCGCAT CCTCGAACCG
ACAGCGGGTC GGGTGCGTTT GCGGGGACGT GTGGCAGCGC TCCTTGAGCT TGGCAGCGGG
TTTCATCCAG AGTTGAGCGG TCGCGATAAT GTGTTTCTCT ACGGTTCACT TATGGGACTC
AGCCGACGCG ACATGGCAGC GCGTCTGGAG GAGATCGTGG CATTCGCCGA CATGGCCGAC
TTCCTCGATC TCCAGGTCAA GTACTATTCC TCTGGCATGT ACACGCGCCT GGCGTTTGCG
GTCGCAACGG CAGTAGACCC CGATATTCTG ATTACCGACG AAGTGCTGGC GGTTGGCGAC
GAGGCGTTTC AGCGCAAGTG CATGGATCGC ATTTTGACAT TCCGCCACGC GGGAAAGACG
ATTGTGTTTG TGTCGCATGC GCTCGATACG GTGCGGACCC TGTGCGATCA TGCCGTCTGG
CTGGATCGCG GCGTGGTTCG TGCGCTCGGA TCAACCGGTG AGGTGATTGA CGCCTACCTC
GCCGAGGTGA ACCGTCGTGA ACGTGAGGCG TTGGCGCGGC ACGAGATGTT GGCTTTGGAG
TCCAACCGAC GGTTCGGCAC GCGCGAAGTC GAGATTACCG GTGTGGAACT GCTCGATACC
GATGGGGTTG CGCGGGCGGT GGCGCACACC GGCGCACCAT TGACCATTCG GATTCGCTAT
CATGCCTGGC AGAACGTGCC GCGTCCCGTT TTCGGTCTGG CAATTCATCA CGAAAGCGGC
ATCCTTCTCG CCGGACCAAA TACATTGTTT GCGGGTCTCG ACATTCCTGC CGTACAGGGC
GGAGGGACGG TTGAGATGCG TATTCCGGCG TTGCCGCTGC TGGCTGGGCG GTACCTCCTC
AGCGCAGCCG TGTACGACGA AACCATGTTG CACGCCTACG ATCATCACGA CCGCCTCTAT
CGCTTTACCG TCCAGAATGA AGGGGGAAGG GAACGCTTCG GCGCAGTGAC GCTGGGAGGC
GTTTGGTCCT GGCGCGCGGC GGGCGCGTGA
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| Protein sequence | MSAAIEFEDV SKRFLLQRDR PVTIQERLAG WLHPAKAADE FWALRNVSFS IARGESFGLI
GHNGAGKSTA LKLMTRILEP TAGRVRLRGR VAALLELGSG FHPELSGRDN VFLYGSLMGL
SRRDMAARLE EIVAFADMAD FLDLQVKYYS SGMYTRLAFA VATAVDPDIL ITDEVLAVGD
EAFQRKCMDR ILTFRHAGKT IVFVSHALDT VRTLCDHAVW LDRGVVRALG STGEVIDAYL
AEVNRREREA LARHEMLALE SNRRFGTREV EITGVELLDT DGVARAVAHT GAPLTIRIRY
HAWQNVPRPV FGLAIHHESG ILLAGPNTLF AGLDIPAVQG GGTVEMRIPA LPLLAGRYLL
SAAVYDETML HAYDHHDRLY RFTVQNEGGR ERFGAVTLGG VWSWRAAGA
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