Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0645 |
Symbol | |
ID | 5538108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 847657 |
End bp | 848592 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640892802 |
Product | cobalamin biosynthesis protein CobD |
Protein accession | YP_001430788 |
Protein GI | 156740659 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA GCGGAATTAG GGTACATATC ACCACTCCTA TGCTCGCACA CAGAAGTCAG ACGCTGCTGC TCGCCCTTGC CGTCGATCTC GTCCTCGGCG ACCCGCCGAA TGCATGGCAT CCAGTGGCGC TCATGGGGCA ATGGATGCGC CTTGGGGAGC GGCTGGCACC GCATGATGCC GCCCAACGCC TTGTATGGGG CGGCGCATGG CTGGCTGGCG GCATAGCGTT GACCGGTTTC GTGGCTGCCT TGCTGCCGCA ACATCCGGCG GTTCAGAGTG GTGTCGCCTC AATGCTGCTG GCGTACCGGG GGCTTGATCG GGCGGTTGGC GAGGTGCAGG CGGCGCTGGA GCGCGGCGAT CTGCCTGAAG CGCGGCGGGT GCTTGGCTGG CGCCTCGTCA GTCGCCCAAC CGACGACCTG CGCGCCGATG AAGTAGCAGG TGCGGCAATC GAGTCGCTGG CAGAAAACCT GAGCGACAGC CTCGTGGCGC CATCCCTGGC GTTCCTGATT GGCGGTCTGC CAGGGATGGC GATCTACCGT CTATCGAACA CGGCGGATGC CATGTGGGGG TATCGCAACG AGCGCTACGA GTATCTGGGC AAAGCAGCAG CGCGTCTCGA TGATATGCTC AATTTCCTGC CAGCGCGCCT GACGGCTGCG CTGATCGTCG CTGCTGCACA GATCGTGTGT GGTCGAGGAA GCGGGGCAAG GCGGATTGTG CGTCGTGACG CAGGTCGCAC TGCTTCGCCG AATGCGGGCT GGCCCATGGC GGCAATGGCG GGCGCACTCG ATACAACATT GACGAAACGC GGGCACTATG TGCTGGGAGA TGGCTCACGC CCGCCCGACG CCGCGATGAT TGGCGAAGCG CGTCGTATTG CGCATGTCGT GCTGGCGTTG CTGGCGGGAG CAGTGGCGCT GGCGCGAAGA AGATGA
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Protein sequence | MRKSGIRVHI TTPMLAHRSQ TLLLALAVDL VLGDPPNAWH PVALMGQWMR LGERLAPHDA AQRLVWGGAW LAGGIALTGF VAALLPQHPA VQSGVASMLL AYRGLDRAVG EVQAALERGD LPEARRVLGW RLVSRPTDDL RADEVAGAAI ESLAENLSDS LVAPSLAFLI GGLPGMAIYR LSNTADAMWG YRNERYEYLG KAAARLDDML NFLPARLTAA LIVAAAQIVC GRGSGARRIV RRDAGRTASP NAGWPMAAMA GALDTTLTKR GHYVLGDGSR PPDAAMIGEA RRIAHVVLAL LAGAVALARR R
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