Gene Rcas_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0642 
Symbol 
ID5538105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp844506 
End bp845174 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content64% 
IMG OID640892799 
Productprecorrin-8X methylmutase CbiC/CobH 
Protein accessionYP_001430785 
Protein GI156740656 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2082] Precorrin isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT TTCCTTCCGA AACGCTCACT GCTGCCAAGA TCGCAGCGCG CTCGTTTGCG 
ATCATCCGCG CGGAACTCGA ACAGCGCGGC TTTCATCTCG AAGCGCCGCT CAACGCAGTG
GTCGAACGGA TTATTCACAG CACGGCGGAT TTCGAGTTCG CCACAATTAC CCGCGCCAGC
TCTGGCGCTG TCGAGGCGGG CGTCGCTGCG CTGCGGTGCG GCTGCCACGT GCTCGCCGAT
GTGCAGATGG TGCGCGCAGG CATCAACGAG CGCCGGGTGC GCGAATTCGG GGGAGCGGTG
CATTGCCTGA ACGACTCGCG TGAGGCGCTG TCGATTGCCG ATGATGATGG GCTGACCCGC
AGCGCGGCCG GCATTCGCGT GGCGCATACA AGTGGTCTGC TCGATGGCGC AGTCGTGGCA
ATCGGCAACG CGCCGACCGC GTTGTATGAA CTGCTGCGCC TGATCAATGG CGGTGCGCGT
CCGGCGCTGG TCATTGGCGT GCCGGTCGGG TTCGTGCATG CAGTCGAGAG CAAAGAGGCG
CTGATGGCGC GCTCCGATGT GCATTGGATT GTGACGGTCG GGCGCAAGGG CGGCTCGACG
GTTGCGGTCG CAATTGTCAA TGCGCTTTTG CGCCTGGCGG CTGGCGTCGA TAATACGGCA
GTCTACTGA
 
Protein sequence
MAEFPSETLT AAKIAARSFA IIRAELEQRG FHLEAPLNAV VERIIHSTAD FEFATITRAS 
SGAVEAGVAA LRCGCHVLAD VQMVRAGINE RRVREFGGAV HCLNDSREAL SIADDDGLTR
SAAGIRVAHT SGLLDGAVVA IGNAPTALYE LLRLINGGAR PALVIGVPVG FVHAVESKEA
LMARSDVHWI VTVGRKGGST VAVAIVNALL RLAAGVDNTA VY