Gene Rcas_0638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0638 
Symbol 
ID5538101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp840503 
End bp841318 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID640892795 
Productprecorrin-4 C11-methyltransferase 
Protein accessionYP_001430781 
Protein GI156740652 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2875] Precorrin-4 methylase 
TIGRFAM ID[TIGR01465] precorrin-4 C11-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATC CTGTTGCCGC CGGAACGGTC TACTTTATTG GCGCGGGACC CGGCGCGCCC 
GATCTGATAA CCGTGCGTGG GCGCGACATT CTGGCGCAGG CGGATCTAAT CCTCTACGCC
GATAGCCTGG TGGACGATGG GTTGCCCGCT TCGTGGGCGC GCGCCAATGC GCGGATCATT
GGCACTGCGG ATATGCACCT GGAACAGATT GTTGCCCTGA TGCGCGACGC TGCGCGCGCC
GGGCAGGTCG TCGCCCGGCT CCACAGCGGC GATCCATCGC TCTATGGCGC TGTTCACGAA
CAAATGGCGG CGCTCGATGC GCTTGACATC CCCTATGAGA TCGTCCCCGG TGTGACAGCG
GCATTTGCGG CGGCTGCCCG TCTCGGCATC GAGTTGACCG TTCCCGAAGT GGTGCAGACG
GTCATTTTTA CCCGCGCTTC CGGGCGCACA CCGATGCCTC CCGGCGAGGA ACTGCATCGC
CTGGCGGCGC ACGGCGCATC GCTGGCGATC TATCTGAGCG TTACCCGCAT CCAGCGTGTG
GTGGACGATC TGCTTGCAGG TGGCGCGTAC ACCCACAACA CACCGGTTGC TGTGCTATAT
CGTGTGAGTT GGCCCGATGA GACAATCATC CACGGGACGC TGGGCGATAT TGTGGCGAAG
GTCAAAGCAG CCGGCTTCAC ACGCCAGGCG CTGATTCTGG TCAGCCCGGC GCTCGATCCG
GCGCTGAAAC AGACCGATAG GGCGACGAGT CGGCTGTATG ATCGCACCTA TACGCATCGT
TTTCGTCATG GAAAGCAGAG CGGAGAGCAG GCGTGA
 
Protein sequence
MTYPVAAGTV YFIGAGPGAP DLITVRGRDI LAQADLILYA DSLVDDGLPA SWARANARII 
GTADMHLEQI VALMRDAARA GQVVARLHSG DPSLYGAVHE QMAALDALDI PYEIVPGVTA
AFAAAARLGI ELTVPEVVQT VIFTRASGRT PMPPGEELHR LAAHGASLAI YLSVTRIQRV
VDDLLAGGAY THNTPVAVLY RVSWPDETII HGTLGDIVAK VKAAGFTRQA LILVSPALDP
ALKQTDRATS RLYDRTYTHR FRHGKQSGEQ A