Gene Rcas_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0623 
Symbol 
ID5538086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp821932 
End bp822768 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content57% 
IMG OID640892781 
Productmethyltransferase type 11 
Protein accessionYP_001430767 
Protein GI156740638 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0996998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCC ATGAGTCGGT CCATCCTACT CCTGACGAAG TCGGCGCCTA CTATGATCTG 
ATGGGACCAT TCTATGCCAC CCTGTGGGGA GACAACATTC ACGTCGGATA TTGGACCGGT
CCAGACGATA TGAGTTCTCA TGTCGAAGCA CAGGATCGGC TGACCGATCT GCTTATCGAA
AAAGTCAATC TGACCACAGG GCAAACGCTC ATCGATGTCG GATGCGGCGT AGGTCGTCCG
GCGATCCGTC TGAGTCGCCA TAGTGGTGCA TCTGTGGTCG GCATAACCGT CAGCGCCGAT
CAGGTAGCAC GCGCCACAAT GCTCGCCGAA CAGAACGGCG TGACGGATCG TGTGCGCTTT
GAGCGCGCTG ACGCGATGGC GCTTCCTTTC GACGACGAAA CGTTCGATGC CGCATGGGCG
TTCGAGTCAT TGCTGCACAT GCCAGATCGT CAGCACGTGC TGCAAGAAAT ATGGCGGGTT
CTGCGCCCAG GCGGAAAGTT CGCGCTGACC GATGTCACCG AGGAGCGACC GCTTTCTGAC
GAGCACCGTG CACTACTCTA CGGGAGTTTT ATGCTTCGCT CGCTGGAAAC GATCGAGCGC
TATCCGGCGC TGGTCACAGC GGCGGGATTT GTCGTCGATG AGGTGATCGA TATCAGTGCT
CACACCAAAC GAACCCTTCA GTTTGTCAGT GATGCATTGA TCCAGAAACG CGACGACATT
CGAGCGCTCT ACGGGGATGA TCTGCTGGCG ACGCTCGAAC AGGTATGGCC GCAACTCGCT
GCCATTCAGC GTGACCACCT GGGATACGTC GTACTGGTTG CGCAGAAGCC TCGATAG
 
Protein sequence
MTAHESVHPT PDEVGAYYDL MGPFYATLWG DNIHVGYWTG PDDMSSHVEA QDRLTDLLIE 
KVNLTTGQTL IDVGCGVGRP AIRLSRHSGA SVVGITVSAD QVARATMLAE QNGVTDRVRF
ERADAMALPF DDETFDAAWA FESLLHMPDR QHVLQEIWRV LRPGGKFALT DVTEERPLSD
EHRALLYGSF MLRSLETIER YPALVTAAGF VVDEVIDISA HTKRTLQFVS DALIQKRDDI
RALYGDDLLA TLEQVWPQLA AIQRDHLGYV VLVAQKPR