Gene Rcas_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0622 
Symbol 
ID5538085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp820924 
End bp821904 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content57% 
IMG OID640892780 
Productterpene synthase metal-binding domain-containing protein 
Protein accessionYP_001430766 
Protein GI156740637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0581453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCAGG ACTATCGCGC ACGACTTGTC TACCCATTTT CCGGAGCGAT AAGCCCGCAT 
GCCGATATAG TCGATCAGGC AACGCTCGCC TGGGCGGCGA TGTTTGGCTT GTTGACGGAC
TCATTGCGCC ACAAAAGTCG TCGCCTCCAG TATGGCTTGC TGGCTGCACG CGCCTATCCA
CGAGCGGACC GTGAGATGTT GCAGATTGCC GCCGATTGGA TTGCATGGCT GTTCTTCATG
GATGACCAAT GCGACGAAAC TGGCATTGGG CGTGATCTCC AACGCATGAT TGCGCTGCAC
GAACGATTTC TTGCAATTCT TGACGGCGCA ACGCCGGAGG CGCATGATTG CGCGCTGACC
TATGCGCTCG CCGATCTTCG TCGTCGACTG GCACTGCGCG CTCCTGATAA CTGGCTGCGC
CGATTCAGCG AGCATGTGCG TCTCTACTTT ACTGCCAATC GCTGGGAAAC GGTCAACCGG
CAGCGCGGTG CAACGCCGAA TGTGGCGACA TATTGCGCCG CGCGCCTGTT TTCGGGCGCC
GTCTATGCAT GCTTCGATCT GATAGAACTG GCAGAGCAGA TCGAACTGCC GTTCTATGCC
CGTCACCACA GCATTGTGCA GCAACTGGAG CAGGCTGCGA ACAATATCAT TTGCTGGTGC
AATGATGTGC TGTCGTATCC CAAGGAAATG CAGCACGGCG ACCGGCACAA TCTGGTGCTG
GTCATTCAGG GCGAGCATCA ATGCTCATTG CCCGAAGCCA TTGACCGCGC GCTCGACCTT
CATGCGCGTG AAGTCGCTAC GTTTGTGCGG AAACGCACCT GTGTCCCATA TTTCGATGCA
GCGGTCAATA CAGCGCTTGA AAAATATGTC ACCGGATTGC AGTTCTGGAT CTGCGCCAAT
CGCGATTGGT CGCTGACGGC AACGCGCTAC GCGCCGACGC ACAAATCGCA GGAAATGGTG
ATGGCAGTCG CGCAACAGTA A
 
Protein sequence
MDQDYRARLV YPFSGAISPH ADIVDQATLA WAAMFGLLTD SLRHKSRRLQ YGLLAARAYP 
RADREMLQIA ADWIAWLFFM DDQCDETGIG RDLQRMIALH ERFLAILDGA TPEAHDCALT
YALADLRRRL ALRAPDNWLR RFSEHVRLYF TANRWETVNR QRGATPNVAT YCAARLFSGA
VYACFDLIEL AEQIELPFYA RHHSIVQQLE QAANNIICWC NDVLSYPKEM QHGDRHNLVL
VIQGEHQCSL PEAIDRALDL HAREVATFVR KRTCVPYFDA AVNTALEKYV TGLQFWICAN
RDWSLTATRY APTHKSQEMV MAVAQQ