Gene Rcas_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0617 
Symbol 
ID5538080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp816260 
End bp816607 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content44% 
IMG OID640892776 
Producttranscriptional modulator of MazE/toxin, MazF 
Protein accessionYP_001430762 
Protein GI156740633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.192438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0273387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CAGGGCAAAT AGTTCTGTTT CAGTTTCCGC AGACCGACCT TGAAAAAGGC 
AAATTGCGCC CTGCTCTTTT GTTGGGAAAA CTTCCAGGGG AATATGATGA CTGGCTGATT
TGCATGGTTT CTTCGCAGAC ACGCCAGTAT ATTGCGGGGT TTGACGAGAT TGTCAAAGAA
GATGATGAAG ATTTTGAGCA GAGTGGGTTG AAAGTTGCGA GTGTAATTCG AGTTGGGCGT
TTAGCGGTTG TTGCTGGAGA AATTCTTCTC GGCGCAATTG GCGAAATTTC TCAAGAGCGT
CTATATCGTG TGAAGCGAAA CTTGTCGAAC TGGTTGTCTG AAAAATAA
 
Protein sequence
MKKAGQIVLF QFPQTDLEKG KLRPALLLGK LPGEYDDWLI CMVSSQTRQY IAGFDEIVKE 
DDEDFEQSGL KVASVIRVGR LAVVAGEILL GAIGEISQER LYRVKRNLSN WLSEK