| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0607 |
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| Symbol | |
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| ID | 5538070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 806453 |
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| End bp | 807268 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892768 |
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| Product | Cof-like hydrolase |
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| Protein accession | YP_001430754 |
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| Protein GI | 156740625 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000496024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.512599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTCC AACTGATCGC CCTTGATCTC GATGGCACGG TCATCGACCA TGATCTGACC
ATTCATCCCG ACGTGCGCGA AACAATTGCC GCCGTGCAGG CGCGCGGTAT TGACGTAACG
CTGGCGACCG GGCGCATGTT TGGCGCAGCA CTGCCGTTTG CGCGCGAACT CGATATTCGC
GCGCCGATTA TCTGTTACCA GGGGGCGCTG GTGCGTCACC CGCTGACCGG CGATACGCTC
TACCATGCGG CAATGCCTGC CGAACTGGCA GCGGCGGCAG TGCGCGAACT CCTCGATGCC
GACATGTGTG TGGTTGCCTA TATCGATGAT ATTCACCATA TCACGGCGTA TCGACCGGAA
CTCGAACGCT ACCTTGCCTT CCATCCCGAA GGGACAGAGA TGGTCGTTAC TCCCGATCTG
GATCGTCTGG TTGAACGTGT GCCACCCACC AAATTGCTGT TCGTCGCCGA GCCGCCGGTG
GTCGAGCGTG AACTGATGCG CCTGACCGCC AGATTCGGCG GCGCACTGGC AGTCGTTCGT
TCGCACGCCA TCTTTGGCGA ACTGACAGCA CCGCACGTCA GCAAGGGAAA TGCACTATCC
GCCCTGGCGC AGTCGCTGGG AGCGCCGCGT GAAGCAGTCC TGGCCATTGG CGATCAGGAG
AACGACATCT CGATGATTAC CTGGGCAGGG CTTGGGCTGG CGATGGGGAA TGCGACACCG
GCAGTGCGCG CACGAGCGCA TGCCGTGCTG CCGCCGGTCA GCGAGGCTGG CGTTGCCCAC
GCGCTGCGAC GCTACGTCTT GAATTGCGCG TCCTGA
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| Protein sequence | MPFQLIALDL DGTVIDHDLT IHPDVRETIA AVQARGIDVT LATGRMFGAA LPFARELDIR
APIICYQGAL VRHPLTGDTL YHAAMPAELA AAAVRELLDA DMCVVAYIDD IHHITAYRPE
LERYLAFHPE GTEMVVTPDL DRLVERVPPT KLLFVAEPPV VERELMRLTA RFGGALAVVR
SHAIFGELTA PHVSKGNALS ALAQSLGAPR EAVLAIGDQE NDISMITWAG LGLAMGNATP
AVRARAHAVL PPVSEAGVAH ALRRYVLNCA S
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