| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0603 |
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| Symbol | |
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| ID | 5538066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 803258 |
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| End bp | 804106 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640892764 |
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| Product | degV family protein |
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| Protein accession | YP_001430750 |
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| Protein GI | 156740621 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0882391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.898641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCA TCAAAATTGT CACGGATAGT TCCAGCGACA TTCCTTTGAG TGTGGCGCAC
GAATTAGGGA TCGAGATCGT CCCGCTCCAG ATTGTCGTCG GCAATCAGAG TTACCGCGCC
GGTCTCGACA TTACTGCGGA GCAGTTTTAC CAGGCAATGC AGGAGAATCG TGCGCAGATC
GCGGCGCAAC CGCCGCCAAT GATGACCTTC GAGCAACTCT ACCGTCGCCT GACGCTGGAG
TATGAATACA TTTTTTCGAT TCATCTCTCC AACCGTATCG TGCCGAATTA TCGCGTGGCG
CAACAGGCGC GCAATCGCCT GCCGGCGTCA TCCAGTCGGG TGGAAATCAT CGACAGTAAG
TTGATCTCGA TGGCGCTCGG CATGATTGTG ATCCACGCGG CGCGTGCGGT GCGCGATGGT
GCAACGCCCG ATGAAGTGAC ACACTTGATC AATCTGCTGA TCCAGCACTG CCATCTGGTC
TTCTTTGTCG ATACCATCGA ATATCTCGAA CACAGCGGTC GGCTTGCGCT GGCAACGACG
GTGCTCGGTT CGATGCAGCG CATCAAGCCG CTGCTCCTGA TCGATGACGG CGAAATCGTC
CCCTATGAGC GCACCCGCAC CCGCGCCAAA GCCATCGAAG GGTTGTATAC CTTCATCGAA
GATTTTCCGC GCGTTCGTGA GGTGACGGCG CTGTACGCAA CGACGCCGGA AGATGTCGAG
AAGTTGCTGG AAAAGGTCGA TCCGATCTTT CCTCGTGATC GGGTGCAGAT TGCACAGTTC
GGTCCGAGTG TCGGCGCGTT CCTCGGACCC GGCGCCATGG GAGTGGCGGT GTTCGAAGGG
ATCGATTGA
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| Protein sequence | MASIKIVTDS SSDIPLSVAH ELGIEIVPLQ IVVGNQSYRA GLDITAEQFY QAMQENRAQI
AAQPPPMMTF EQLYRRLTLE YEYIFSIHLS NRIVPNYRVA QQARNRLPAS SSRVEIIDSK
LISMALGMIV IHAARAVRDG ATPDEVTHLI NLLIQHCHLV FFVDTIEYLE HSGRLALATT
VLGSMQRIKP LLLIDDGEIV PYERTRTRAK AIEGLYTFIE DFPRVREVTA LYATTPEDVE
KLLEKVDPIF PRDRVQIAQF GPSVGAFLGP GAMGVAVFEG ID
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