| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0602 |
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| Symbol | |
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| ID | 5538065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 802409 |
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| End bp | 803254 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892763 |
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| Product | degV family protein |
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| Protein accession | YP_001430749 |
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| Protein GI | 156740620 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.129172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCAG TCAAGATCGT TGTTGACTCA ACTGCGGATA TTCCTGCCGA TGTCCGCGCT
GCGTATCATA TCCATGTCGT TCCGGTGCTG TTACACCGCC GGGGCGCAAC GTTGCGCGAC
GACATCGACA TCAGCCGCGA TGAGTACTAT CGCTGGATCG CGGAACATGA CGACCTTCCA
ACCACGTCCG CGCCGTCGGT TGGAATGTTC GAGGAGGTGT TTCGGGAATT GACCCGTGAT
GGCAGCGCGG TGCTGTCGCT CAGCGTCGCC GCCGGCTTGA GCGCCACCTA CGGCGCTGCC
GTCCAGGCAG CGCGCCTGGT TGCCGATGCC CGCATTGTCT GTGTGGACAG CCACTCGATT
GCGATGCCCA TTGCCTACCT GGCGCTCGCC GCCGCGCGCC GCCTGTCGCA GGGGGCAACA
CTCGATGAGG CAGTTGCATT GGTGGAACGT CTGCGCGATC GGACGGTCGC GTATGTGGCG
CTCCAGACAT TGCGCTACCT GGAACGCGGC GGGCGTATCA GTCGCACGCG CGCGTTGTTG
GGTACATTGC TCGATGTGAA GCCAATCCTG GAAGTGCGCG ACTCGCAGGT GCTGCCGGTT
GAACGGGTGC GCACCTGGCG AAGGGTTCCG GCGCGCTTGC TGGAACTGGC GCAGTCGCGC
GGCGTGTATC AGGAATTGAG CGTTGTCTAC ACGACCGACC GCGCCGATGC CGAATCGCTG
GCGGATGCCT GCGCCAATGC GGGATTACTC GTTCGTGATC GTATTCGCAC CGTGCAGATT
GGTGCGGTGC TTGGTACGCA TATGGGACCC GGAGCGCTCG GCATCACCGG TCTGCTGGCT
TCATAA
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| Protein sequence | MPSVKIVVDS TADIPADVRA AYHIHVVPVL LHRRGATLRD DIDISRDEYY RWIAEHDDLP
TTSAPSVGMF EEVFRELTRD GSAVLSLSVA AGLSATYGAA VQAARLVADA RIVCVDSHSI
AMPIAYLALA AARRLSQGAT LDEAVALVER LRDRTVAYVA LQTLRYLERG GRISRTRALL
GTLLDVKPIL EVRDSQVLPV ERVRTWRRVP ARLLELAQSR GVYQELSVVY TTDRADAESL
ADACANAGLL VRDRIRTVQI GAVLGTHMGP GALGITGLLA S
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